Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_P05
(1258 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.027
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.063
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.063
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.11
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.33
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.77
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.0
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.3
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 3.1
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 9.5
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 9.5
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.027
Identities = 21/54 (38%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Frame = -2
Query: 171 RGRLXARPPXXXXLPPPPXSXAPP---XPPXPXXPXXAPPXXLXWPS-PPXPXP 22
R + A P PPPP PP PP P P APP L S P P P
Sbjct: 1693 RPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 33.1 bits (72), Expect = 0.083
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = -2
Query: 150 PPXXXXLPPPPXSXAPPXPPXP---XXPXXAPPXXLXWPSPPXPXPXPXXXXP 1
PP PP AP PP P P APP PS P P P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP-PPPLPASSAP 1741
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = -2
Query: 156 ARPPXXXXLPPPPXSXAPPXPPXPXXPXXAPPXXLXWPSPPXPXPXPXXXXP 1
A P PP P S PP P P P PS P P P
Sbjct: 1469 APAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLP 1520
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.5 bits (73), Expect = 0.063
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = +2
Query: 17 GXGXGXGGEGQXXXXGGAXXGXXGXGGXGGAXXXGGGGRXXXXGG 151
G G G GG + GGA G G GG G GGR GG
Sbjct: 27 GFGGGRGG-ARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 31.1 bits (67), Expect = 0.33
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +2
Query: 23 GXGXGGEGQXXXXGGAXXGXXGXGGX-GGAXXXGGGGRXXXXGGRAXRR 166
G G G GG G G GG GGA G GG GGR R
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGAR 54
Score = 30.3 bits (65), Expect = 0.58
Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = +2
Query: 2 GXXXXGXGXGXGGEGQXXXXGGAXXGXXGXGGXGGAXXXGG--GGRXXXXGGR 154
G G G GG G G G G GG GG GGR GGR
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGR 64
Score = 29.1 bits (62), Expect = 1.3
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +2
Query: 17 GXGXGXGGEGQXXXXGGAXXGXXGXGGXGGAXXXGGGGRXXXXGGRAXR 163
G G GG G G G G G GG GGR G R R
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRG-GARGGGRGGARGGRGGRGGARGGR 57
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.063
Identities = 19/43 (44%), Positives = 20/43 (46%)
Frame = -2
Query: 129 PPPPXSXAPPXPPXPXXPXXAPPXXLXWPSPPXPXPXPXXXXP 1
PP P S AP PP P APP P+PP P P P P
Sbjct: 447 PPLPPS-APIAPPLPAGMPAAPPLPPAAPAPP-PAPAPAPAAP 487
Score = 31.5 bits (68), Expect = 0.25
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -2
Query: 156 ARPPXXXXLPPPPXSXAPPXPPXPXXPXXAPPXXLXWP-SPPXPXPXP 16
A P PP AP PP P APP P +PP P P
Sbjct: 427 APPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -2
Query: 147 PXXXXLPPPPXSXAPPXPPXPXXPXXAPPXXLXWPSPPXPXPXP 16
P LPP PP P P P AP PS P P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAP-PSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = -2
Query: 147 PXXXXLPPPPX---SXAPPXPPXPXXPXXAPPXXLXWPSPPXPXP 22
P +PPP S P PP P P P PP P P
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Score = 27.9 bits (59), Expect = 3.1
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = -2
Query: 225 PXXPPXRTTXSXXRXXXXRGRLXARPPXXXXLPPPPXSXAPPXPPXPXXPXXAPPXXLXW 46
P PP R PP PPPP S A P P APP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPP-----PPPPRSNAAGSIPLPPQGRSAPP----- 362
Query: 45 PSPPXPXPXPXXXXP 1
P PP P P
Sbjct: 363 PPPPRSAPSTGRQPP 377
Score = 26.6 bits (56), Expect = 7.2
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 10/65 (15%)
Frame = -2
Query: 225 PXXPPXRTTXSXXRXXXXRGRLXARPPXXXXLP-----PPPXSXA-----PPXPPXPXXP 76
P PP R+ + +GR PP P PPP S + PP PP P P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP-PAIP 396
Query: 75 XXAPP 61
+ P
Sbjct: 397 GRSAP 401
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Frame = -2
Query: 150 PPXXXXLPPPPXSXAPPXPP----XPXXPXXAPPXXLXWPSPPXPXPXP 16
PP P APP PP P P P P+ P P P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = -2
Query: 150 PPXXXXLPPPPXSXAPPXPPXPXXPXXAPPXXLXWPSPP 34
PP PP P + P PP P PP P+ P
Sbjct: 450 PPSAPIAPPLP-AGMPAAPPLPPAAPAPPPAPAPAPAAP 487
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -2
Query: 129 PPPPXSXAPPXPPXPXXPXXAPPXXLXWPSPPXPXP 22
PPPP + P P P P + P PP P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 31.9 bits (69), Expect = 0.19
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = -2
Query: 150 PPXXXXLPPP---PXSXAPPXPPXPXXPXXAPPXXLXWPSPPXPXPXP 16
PP +P P P PP P P PP + PP P P P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 31.1 bits (67), Expect = 0.33
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -2
Query: 147 PXXXXLPPP-PXSXAPPXPPXPXXPXXAPPXXLXWPSPPXPXP 22
P +PPP P PP PP P A P P PP P P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGP-----PPPPPPPP 783
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = -2
Query: 129 PPPPXSXAPPXPPXPXXPXXAPPXXLXWPSPPXPXPXP 16
PPP + A P PP P P + + P P P
Sbjct: 766 PPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.33
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = -2
Query: 150 PPXXXXLPPPPXSXAP--PXPPXPXXPXXAPPXXLXWPSPP 34
PP LPPP AP P P P PP P PP
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 30.7 bits (66), Expect = 0.44
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -2
Query: 150 PPXXXXLPPPPXSXAPPXPPXPXXPXXAPPXXLXWPS--PPXPXPXP 16
PP PP P S PP P P +PP PS PP P P
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAA--PVKSPPSAPSLPSAVPPMPPKVP 202
Score = 30.3 bits (65), Expect = 0.58
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 4/56 (7%)
Frame = -2
Query: 156 ARPPXXXXLPPPPXSXAPP--XPPXPXXPXXAPPXXLXWPS--PPXPXPXPXXXXP 1
A PP P P PP PP P P +P PS PP P P P
Sbjct: 122 AAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 156 ARPPXXXXLPPPPXSXAPPXPPXPXXPXXAPP 61
A PP +PPPP S AP APP
Sbjct: 193 AVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.9 bits (64), Expect = 0.77
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +2
Query: 17 GXGXGXGG-EGQXXXXGGAXXGXXGX-GGXGGAXXXGGGG 130
G G G GG EG GG G G GG GG GGG
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 23 GXGXGGEGQXXXXGGAXXGXXGXGGXGGAXXXGGGGRXXXXGG 151
G G G G GG G GG GG GGG GG
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 17 GXGXGXGGEGQXXXXGGAXXGXXGXGGXGGAXXXGGGGRXXXXGG 151
G G GG G G G G GG GG GGG GG
Sbjct: 215 GEGHHHGGHGGFGGGPGGFEG--GPGGFGGGPGGFGGGLGGFGGG 257
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = -2
Query: 126 PPPXSXAPPXPPXPXXPXXAPPXXLXWPSPPXPXPXPXXXXP 1
PP + PP P APP + +PP P P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVP 1053
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -2
Query: 150 PPXXXXLPP-PPXSXAPPXP-PXPXXPXXAPPXXLXWPSPPXPXP 22
P +PP PP S APP P P P PP +PP P P
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS----TAPPVPTP 1222
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = -2
Query: 129 PPPPXSXAPPXPPXPXXPXXAPPXXLXWPSPPXPXPXPXXXXP 1
PP P P P P P PS P P P P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIP 1074
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = -2
Query: 156 ARPPXXXXLPPPPXSXAPPXPPXPXXPXXAPPXXLXWPSPPXPXP 22
A P + PP PP P APP + +PP P P
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = -2
Query: 156 ARPPXXXXLPPPPXSXAPPXPPXPXXPXXAPPXXLXWPSPPXPXP 22
A P + PP PP P APP +PP P P
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 27.1 bits (57), Expect = 5.4
Identities = 15/46 (32%), Positives = 16/46 (34%), Gaps = 4/46 (8%)
Frame = -2
Query: 126 PPPXSXAPPXPPXPXXPXXAPPXXLXWPSPP----XPXPXPXXXXP 1
P P + PP PP P P P PP P P P P
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = -2
Query: 147 PXXXXLPPPPXSXAPPXPPXPXXPXXAPPXXLXWPSPPXPXP 22
P +PP P + PP P PP +PP P P
Sbjct: 1086 PAPSGIPPVP-KPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = -2
Query: 150 PPXXXXLPP-PPXSXAPPXP-PXPXXPXXAPPXXLXWPSPPXPXP 22
P +PP PP S APP P P P P +PP P P
Sbjct: 1201 PKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTA---KAPPVPAP 1242
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/42 (28%), Positives = 15/42 (35%)
Frame = -2
Query: 147 PXXXXLPPPPXSXAPPXPPXPXXPXXAPPXXLXWPSPPXPXP 22
P PP + + PP P PP +PP P P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -2
Query: 150 PPXXXXLPPPPXSXAPPXPPXPXXP 76
PP PPPP PP P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 129 PPPPXSXAPPXPPXPXXPXXAPPXXLXWPSPPXPXP 22
P PP + APP P P P L PP P
Sbjct: 492 PLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPP 527
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = -2
Query: 156 ARPPXXXXLPPPPXSXAPPXP--PXPXXPXXAPPXXLXWPSPPXPXP 22
++P +P P PP P P P P P P P P P
Sbjct: 90 SKPLLNELVPEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLP 136
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 29 GXGGEGQXXXXGGAXXGXXGXGGXGGAXXXGGGG 130
G G G GG G G GG GG G GG
Sbjct: 446 GGGSRGGRGGFGGRG-GFGGRGGFGGGRGRGRGG 478
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,449,606
Number of Sequences: 5004
Number of extensions: 13581
Number of successful extensions: 226
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 681602054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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