Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_P04
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical pr... 305 2e-83
Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical pr... 28 8.0
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 28 8.0
AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell death-re... 28 8.0
AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical ... 28 8.0
AF068712-1|AAC17779.1| 500|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical
protein C47B2.5 protein.
Length = 246
Score = 305 bits (750), Expect = 2e-83
Identities = 143/245 (58%), Positives = 192/245 (78%), Gaps = 2/245 (0%)
Frame = +1
Query: 136 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 315
MA+RV +E +N+VGVF LTN+YCLV +GG++NFYS+ EAEL++ IPV+H S+ RI+G
Sbjct: 1 MALRVDYEGSNDVGVFCTLTNSYCLVGVGGTQNFYSILEAELSDLIPVVHTSIASTRIVG 60
Query: 316 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 495
R+TVGN++GLLVP++TTD ELQH+RNSLP+ V ++RV+ERLSALGNVIACND+VA+VH +
Sbjct: 61 RLTVGNRHGLLVPNATTDQELQHLRNSLPDEVAIRRVDERLSALGNVIACNDHVAIVHAE 120
Query: 496 LDKDTEEILADTLNVEVFRQTIAGNVLVGSYTALSXRGGLVHPKTNIQDQDELSSLLQVP 675
+ +TE+ L + L VEVFR ++A N LVGSY LS G LV +T + Q E+++LLQ+P
Sbjct: 121 ISAETEQALVEVLKVEVFRVSLAQNSLVGSYCILSSNGCLVAARTPPETQREIAALLQIP 180
Query: 676 LVAGTVNRGSDVVXAGMVVXDWCAFCGLDXTSTEISVIESVFXLMMLXDXNXI--YMRAS 849
+VAGT NRGS+++ AGMVV DW AFCGLD TSTE+SV+ES+F L I +R +
Sbjct: 181 VVAGTCNRGSELIGAGMVVNDWVAFCGLDSTSTELSVVESIFKLGEQGAPTSISNQLRDT 240
Query: 850 LIDSM 864
LI+SM
Sbjct: 241 LIESM 245
>Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical
protein C14A4.4b protein.
Length = 594
Score = 28.3 bits (60), Expect = 8.0
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 313 GRMTVGNKNGLLVPSSTTDTELQHIRNSLPE-NVKLQRVEERLSALGNVIACNDYVALVH 489
G V NGL P + D EL NS P N ++R E+RL+AL N + + A+
Sbjct: 40 GAGLVRESNGL--PKAGADYELY---NSYPTFNTFMKRSEQRLNALMNKVTKSIGCAMRV 94
Query: 490 PDLDKDTE 513
PD+ E
Sbjct: 95 PDVGSSVE 102
>Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical
protein C14A4.4a protein.
Length = 876
Score = 28.3 bits (60), Expect = 8.0
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 313 GRMTVGNKNGLLVPSSTTDTELQHIRNSLPE-NVKLQRVEERLSALGNVIACNDYVALVH 489
G V NGL P + D EL NS P N ++R E+RL+AL N + + A+
Sbjct: 40 GAGLVRESNGL--PKAGADYELY---NSYPTFNTFMKRSEQRLNALMNKVTKSIGCAMRV 94
Query: 490 PDLDKDTE 513
PD+ E
Sbjct: 95 PDVGSSVE 102
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 495 LRQRHRRNISRHIKRGSIQTNNSGKRACWFLHCVE 599
+ R R IS H+ + +Q N ACW L+C+E
Sbjct: 2 VNNRSREVISIHVGQAGVQMGN----ACWELYCLE 32
>AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell
death-related nuclease 3 protein.
Length = 876
Score = 28.3 bits (60), Expect = 8.0
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 313 GRMTVGNKNGLLVPSSTTDTELQHIRNSLPE-NVKLQRVEERLSALGNVIACNDYVALVH 489
G V NGL P + D EL NS P N ++R E+RL+AL N + + A+
Sbjct: 40 GAGLVRESNGL--PKAGADYELY---NSYPTFNTFMKRSEQRLNALMNKVTKSIGCAMRV 94
Query: 490 PDLDKDTE 513
PD+ E
Sbjct: 95 PDVGSSVE 102
>AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical
protein Y39C12A.8 protein.
Length = 365
Score = 28.3 bits (60), Expect = 8.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = +1
Query: 397 LPENVKLQRVEERLSALGNVIACNDYVALVHPDLDKDTEEI 519
+P++ K +E+ +GN+ C D+ +++ D +EI
Sbjct: 3 IPKSAKSDYTKEQKDLVGNICQCKDFYKILNVDKKASPDEI 43
>AF068712-1|AAC17779.1| 500|Caenorhabditis elegans Hypothetical
protein T09H2.1 protein.
Length = 500
Score = 28.3 bits (60), Expect = 8.0
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +1
Query: 400 PENVKLQRVE-ERLSALGNVIACNDYVALVHPDLDKDTEEILADTLNVEVFRQTIAGNVL 576
PE VK+ R E L+ I+ D + + + + + +A LNV +FRQT +
Sbjct: 328 PEVVKIAREELVHLTGGHRSISLTDKTSTPYLNAVINEVQRIASILNVNIFRQTSEDTTV 387
Query: 577 ----VGSYTALSXRGGLVHPKTNI 636
+ + TAL+ L+H N+
Sbjct: 388 NGQPIAAGTALTTHLSLIHTDENL 411
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,925,847
Number of Sequences: 27780
Number of extensions: 386529
Number of successful extensions: 914
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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