Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_P04
         (905 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              25   1.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.8  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   5.1  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   5.1  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   5.1  
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    23   5.1  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    22   8.8  

>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 355 SSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIAC 465
           S+ T  EL+ +R+S    +KL   EE     G  +AC
Sbjct: 38  SNMTFHELKKLRDSSEARIKLINEEENFRNYGCFLAC 74


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +3

Query: 36   DFXGA--CVFPQPT*RIASYCEIHNKGKG*TKN 128
            DF G   C+F +P   +ASY  I N+ +G + N
Sbjct: 1608 DFVGPKNCLFRKPEHFVASYALISNQCEGDSLN 1640


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 25  GILKILXALVFFRNPREESHHIVKYIIREK 114
           G+LK+L  L F  +P   +   V Y  +EK
Sbjct: 4   GVLKLLVLLTFLLHPSRCTQGKVNYREKEK 33


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 25  GILKILXALVFFRNPREESHHIVKYIIREK 114
           G+LK+L  L F  +P   +   V Y  +EK
Sbjct: 4   GVLKLLVLLTFLLHPSRCTQGKVNYREKEK 33


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 358 STTDTELQHIRNSLPENV 411
           ST D  L  IRN +PEN+
Sbjct: 182 STLDAILDIIRNMVPENL 199


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 13/54 (24%), Positives = 22/54 (40%)
 Frame = +1

Query: 259 LAETIPVIHASVGGCRIIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQ 420
           + +T    H    G R      + N+N +   +   + ELQ +R  L  N+  Q
Sbjct: 20  MCQTFTYSHGWTNGKRSTSLEELANRNAIQSDNVFANCELQKLRLLLQGNINNQ 73


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 49  LVFFRNPREESHHIVK 96
           +VFFR  R+  HH+++
Sbjct: 190 VVFFRFERQIGHHLIQ 205


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,854
Number of Sequences: 438
Number of extensions: 4750
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)