Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_O23
(1456 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0610 - 25449085-25453284 33 0.43
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 33 0.43
08_01_0059 - 394001-394708 32 1.3
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 3.0
02_05_0686 - 30900748-30902167,30903442-30904742 30 4.0
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 30 5.2
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 29 6.9
07_03_1751 - 29215074-29216270 29 6.9
01_01_0570 - 4231100-4232560 29 6.9
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 29 9.2
03_02_0765 + 11000724-11002496 29 9.2
03_01_0515 - 3864796-3865425 29 9.2
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 33.5 bits (73), Expect = 0.43
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPAXAP 655
PPP P PPP + P ++ P P PPPA P
Sbjct: 1265 PPPAPVSLPPPPVKSLPPPAPVSLPPPVVKSLPPPAPVSLPPPAVKP 1311
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPP 643
PPP P PPP P ++ P P PPP
Sbjct: 1137 PPPVPVSSPPPPEKSPPPPAPVILPPPPIKSPPPPAPVISPPP 1179
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPP 643
PPP P PPP P ++ P P PPP
Sbjct: 1153 PPPAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPP 1195
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPP 643
PPP P PPP P ++ P P PPP
Sbjct: 1169 PPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPP 1211
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPP 643
PPP P PPP P ++ P P PPP
Sbjct: 1185 PPPAPVILPPPPVKSPPPPAPVISPPPPVKSPPPPAPVILPPP 1227
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPP 643
PPP P PPP P ++ P P PPP
Sbjct: 1201 PPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPP 1243
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPAXAP 655
PPP PPP + P + P P PPPA P
Sbjct: 1281 PPPAPVSLPPPVVKSLPPPAPVSLPPPAVKPLPPPAPVSLPPPAVKP 1327
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 33.5 bits (73), Expect = 0.43
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 563 PPPXXXTXPXXXXRAXXXPXPPXXPPPAXAP 655
PPP T P P PP PPPA AP
Sbjct: 92 PPPLLPTPPPPPASISPTPAPPLPPPPAPAP 122
>08_01_0059 - 394001-394708
Length = 235
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 548 PXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPAXAP 655
P PP T P RA P PP PPP P
Sbjct: 5 PPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTP 40
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.7 bits (66), Expect = 3.0
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPP 640
PPP +P PPP P + P PP PP
Sbjct: 552 PPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPP 593
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPAXAP 655
PPP A PPP P + P P PPP P
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPP 359
Score = 30.3 bits (65), Expect = 4.0
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPP 643
PPP P G PPP P P PP PPP
Sbjct: 330 PPPKAAPPPPPPKGPPPPPPAKGPPPPP--PPKGPSPPPPPPP 370
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 29.9 bits (64), Expect = 5.2
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +2
Query: 563 PPPXXXTXPXXXXRAXXXPXPPXXPPPAXAPXXXXSXXXTXXXPXHXP 706
PPP P A P PP PPP P T P P
Sbjct: 231 PPPPPPPKPANIAGAPGLPLPPPPPPPPGPPPREIVPGQTLLPPPPPP 278
>10_02_0157 -
5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 29.5 bits (63), Expect = 6.9
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPAXAP 655
PP AP PP T P A P PP PPPA P
Sbjct: 32 PPSLPTTTPPAPTVVAPP--LPTTPPPAVVAPSPPLPPLTPPPAIVP 76
>07_03_1751 - 29215074-29216270
Length = 398
Score = 29.5 bits (63), Expect = 6.9
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -2
Query: 654 GAXAGGGXXGGXGXXXARXXXXGXVXXXGGGXXPXGAXXXXPXXGGG 514
G AGGG GG G G GGG G GGG
Sbjct: 230 GGGAGGGHGGGGGLGGGAGGGAGVGGGAGGGAGAGGGLGAGGGAGGG 276
>01_01_0570 - 4231100-4232560
Length = 486
Score = 29.5 bits (63), Expect = 6.9
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -2
Query: 654 GAXAGGGXXGGXGXXXARXXXXGXVXXXGGGXXPXGAXXXXPXXGGG 514
G AGGG GG G G GGG G GGG
Sbjct: 135 GVGAGGGLRGGGGVGAGGGGGFGGGAGGGGGIGAGGGFGGGAGAGGG 181
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPA 646
P P P PPP P P PP PPPA
Sbjct: 575 PMPPLKASPVPPPEPSPPPAPKAAPPPPPPKSTGPGPPRPPPPA 618
>03_02_0765 + 11000724-11002496
Length = 590
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -2
Query: 654 GAXAGGGXXGGXGXXXARXXXXGXVXXXGGGXXPXGAXXXXPXXGGG 514
GA GGG GG G G GGG G GGG
Sbjct: 257 GAGGGGGLSGGAGGGLGGGAGAGGGGGLGGGTGGGGGLGGGTGGGGG 303
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.1 bits (62), Expect = 9.2
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPAXAP 655
PPP G P PPP + P P PP PPPA +P
Sbjct: 62 PPPAAGPLMPPPP---PPPSVTSSPPPP------PLPPPPPPPAASP 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,513,417
Number of Sequences: 37544
Number of extensions: 127791
Number of successful extensions: 1585
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4629241092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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