Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_O23
(1456 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.29
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.29
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.29
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 1.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 1.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 1.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 2.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 2.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 2.0
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 3.6
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.29
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +2
Query: 503 SXXXPPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPAXA 652
S PPP G A G PPP P P P PPP A
Sbjct: 236 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA 285
Score = 31.9 bits (69), Expect = 1.2
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPAXAP 655
PPP G P G PPP P RA PP PPP +P
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSP-PPPRAG---SPPPPPPPRGSP 307
Score = 29.9 bits (64), Expect = 4.7
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPP 643
PPP G P G PPP P P PPP
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.29
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +2
Query: 503 SXXXPPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPAXA 652
S PPP G A G PPP P P P PPP A
Sbjct: 257 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA 306
Score = 31.9 bits (69), Expect = 1.2
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPAXAP 655
PPP G P G PPP P RA PP PPP +P
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSP-PPPRAG---SPPPPPPPRGSP 328
Score = 29.9 bits (64), Expect = 4.7
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPP 643
PPP G P G PPP P P PPP
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.29
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +2
Query: 503 SXXXPPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPAXA 652
S PPP G A G PPP P P P PPP A
Sbjct: 242 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA 291
Score = 31.9 bits (69), Expect = 1.2
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPAXAP 655
PPP G P G PPP P RA PP PPP +P
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSP-PPPRAG---SPPPPPPPRGSP 313
Score = 29.9 bits (64), Expect = 4.7
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPP 643
PPP G P G PPP P P PPP
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPA 646
PPP G G PPP P A P PP PPPA
Sbjct: 219 PPPIGGIAPVNAHGAPPPP-----PLPPVGAGAPPPPPPPPPPA 257
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPA 646
PPP G G PPP P A P PP PPPA
Sbjct: 205 PPPIGGIAPVNAHGAPPPP-----PLPPVGAGAPPPPPPPPPPA 243
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPA 646
PPP G G PPP P A P PP PPPA
Sbjct: 205 PPPIGGIAPVNAHGAPPPP-----PLPPVGAGAPPPPPPPPPPA 243
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPAXAP 655
PPP G G PPP P P PP PP P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPAXAP 655
PPP G G PPP P P PP PP P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 515 PPPXXGXXXXAPXGXXPPPXXXTXPXXXXRAXXXPXPPXXPPPAXAP 655
PPP G G PPP P P PP PP P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.3 bits (65), Expect = 3.6
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -2
Query: 654 GAXAGGGXXGGXGXXXARXXXXGXVXXXGGGXXPXGAXXXXPXXGGG 514
G GGG GG G G GGG P G GGG
Sbjct: 202 GGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPGGGYGMGGGGGGG 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,324,724
Number of Sequences: 27780
Number of extensions: 72163
Number of successful extensions: 504
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4162671200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -