Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_O22
(894 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.008
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.018
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.072
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.29
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.39
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 30 0.51
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.6
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 28 1.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 3.6
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.6
SPAC27F1.07 |||dolichyl-diphospho-oligosaccharide-protein glycos... 26 6.3
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.9 bits (79), Expect = 0.008
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 754 PPPXXXPPPPAKXXXPFXPPXPXPPP 831
PPP PPPP+ P PP PPP
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 33.9 bits (74), Expect = 0.031
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = +3
Query: 759 PXXXPP--PPRXXPXXFXXPXPPPPPXXXXXPPXXXXPPXXPP 881
P PP P P P PPPPP PP P PP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 33.9 bits (74), Expect = 0.031
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 756 PPXXXPPPPRXXPXXFXXPXPPPPPXXXXXPPXXXXP 866
PP PPPP P P PPPP P P
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 29.5 bits (63), Expect = 0.67
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 759 PXXXPPPPRXXPXXFXXPXPPPPPXXXXXPPXXXXPPXXPPP 884
P PP P P PPP PP PP PPP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPP--PSAPPMPAGPPSAPPP 1733
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +1
Query: 754 PP--PXXXPPPPAKXXXPFXPPXPXPPPXXXXPXXXXXXPPXXPP 882
PP P PP P PP PPP P PP PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP--MPAGPPSAPP 1732
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 753 SPPXXXPPPPRXXPXXFXXPXPPPPPXXXXXPPXXXXPPXXPPP 884
S P PPP P P P PP P P P P
Sbjct: 1703 SAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.018
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +1
Query: 664 PPXXPPKXXXPXXXPXXFFXXXRGXXXGXFPPPXXXPPPPAKXXXPFXPPXPXPPP 831
PP PP P P G PPP PPPP PP P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGG-PPP---PPPPPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +3
Query: 753 SPPXXXPPPPRXXPXXFXXPXPPPPPXXXXXPPXXXXPPXXPPP 884
SPP PPP P P P PPP P PP PPP
Sbjct: 731 SPPP--PPPAVIVPTPAPAPIPVPPPAPIMGGP----PPPPPPP 768
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +2
Query: 758 PLXXPPPPPXXXXXLXXPPPPXPPXXXXXPXXPXXXPXXPPP 883
P+ PPP P + PPPP PP P P PPP
Sbjct: 748 PIPVPPPAPI----MGGPPPPPPPPGVAGAGPP--PPPPPPP 783
Score = 30.3 bits (65), Expect = 0.39
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 772 PPPPAKXXXPFXPPXPXPPPXXXXPXXXXXXPPXXPPXXG 891
PPPP P P P P P P PP PP G
Sbjct: 733 PPPPPAVIVPTPAPAPIPVP---PPAPIMGGPPPPPPPPG 769
Score = 29.5 bits (63), Expect = 0.67
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 755 PPLXXPPPPPXXXXXLXXPPPPXPP 829
P + PPPPP PPP PP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPP 780
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.7 bits (71), Expect = 0.072
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -3
Query: 883 GGGXXGGXXXXGGXXXXXGGGGGXGXXKXXGXXRGGGGXXXGG 755
GGG G GG GG GG G G GG G GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG 229
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = -2
Query: 890 PXXGGXXGGXXXXXXGXXXXGG-GXGXGGXKGXXXXAGGGGXXXGGG 753
P G GG GG G G GG +G GGG GGG
Sbjct: 204 PGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = -3
Query: 883 GGGXXGGXXXXGGXXXXXGG-GGGXGXXKXXGXXRGGGGXXXGGEXXP 743
GGG G GG GG GGG G G GG G GG P
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLG---GFGGGPGGFGGGPGGHGGP 271
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = -1
Query: 879 GGXXGXXXGXXGXXXXXGGXGG--GGXKRXXXFXGGGGGXXRGGKXXXXXP 733
GG G G G GG GG GG GGG G GG P
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -1
Query: 882 GGGXXGXXXGXXGXXXXXGGXGGGGXKRXXXFXGGGGGXXRGG 754
GGG G G G G G G GGG G GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG 236
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 754 PPPXXXPPPPAKXXXPFXPPXPXPPP 831
PP PPPP P P P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 0.89
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 753 SPPXXXPPPPRXXPXXFXXPXPPPPP 830
S P PPPP P F P PPPP
Sbjct: 3 SLPPGNPPPP-PPPPGFEPPSQPPPP 27
Score = 29.1 bits (62), Expect = 0.89
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 816 PPPPPXXXXXPPXXXXPPXXPPP 884
PPPPP PP PP PPP
Sbjct: 10 PPPPPPPGFEPPSQ--PPPPPPP 30
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 816 PPPPPXXXXXPPXXXXPPXXPPP 884
PPPPP PP PP PPP
Sbjct: 9 PPPPP-----PPPGFEPPSQPPP 26
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 753 SPPXXXPPPPRXXPXXFXXPXPPPPP 830
+PP PPP P P PPPPP
Sbjct: 8 NPPPPPPPPGFEPP---SQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 799 PFXPPXPXPPPXXXXPXXXXXXPP 870
P PP P PPP P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.3 bits (65), Expect = 0.39
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -1
Query: 879 GGXXGXXXGXXGXXXXXGGXGGG-GXKRXXXFXGGGGGXXRGGK 751
GG G G G GG GGG G R GGG G RGG+
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGAR-----GGGRGGARGGR 47
Score = 29.1 bits (62), Expect = 0.89
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 880 GGXXGGXXXXGGXXXXXGGGGGXGXXKXXGXXRGGGGXXXG 758
GG GG G GGG G G RGG G G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 877 GXXGGXXXXGGXXXXXGGGGGXGXXKXXGXXRGGGGXXXGG 755
G GG G G GG G G RGG G GG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -3
Query: 880 GGXXGGXXXXGGXXXXXGG-GGGXGXXKXXGXXRGGGGXXXGG 755
GG G GG GG GGG G + G RGG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGG--RGGARGGRGG 49
Score = 27.5 bits (58), Expect = 2.7
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -1
Query: 882 GGGXXGXXXGXXGXXXXXGGXGG-GGXKRXXXFXGGGGGXXRGGKXXXXXP 733
GGG G G G GG GG GG + GG G +GG P
Sbjct: 29 GGGRGGARGGGRGGAR--GGRGGRGGARGGRGGSSGGRGGAKGGAKVIIEP 77
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = -1
Query: 879 GGXXGXXXGXXGXXXXXGGXGGGGXKRXXXFXGGGGG--XXRGG 754
GG G G G GG GGG GG GG RGG
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 880 GGXXGGXXXXGGXXXXXGGGGGXGXXKXXGXXRGGGGXXXGG 755
GG GG GG GGG G G RGG GG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGG-RGGARGGRGG 59
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.9 bits (64), Expect = 0.51
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +1
Query: 754 PPPXXXPPPPAKXXXPFXPPXPXPPPXXXXPXXXXXXPPXXPP 882
P P PPA P P P PP P P PP
Sbjct: 659 PEAPSVPQPPAAPVVPEVPSVPQPPAVPVVPEAGQLNEPVVPP 701
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/72 (27%), Positives = 20/72 (27%), Gaps = 3/72 (4%)
Frame = +1
Query: 664 PPXXPPKXXXPXXXPXXFFXXXRGXXXGXFPPPXXXPPPPAKXXXPFXP---PXPXPPPX 834
PP PP P G PPP P A P P P PPP
Sbjct: 312 PPPPPPSRRNRGKPPIG-----NGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Query: 835 XXXPXXXXXXPP 870
P PP
Sbjct: 367 RSAPSTGRQPPP 378
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +2
Query: 755 PPLXXPPPPPXXXXXLXXPPPPXPPXXXXXPXXPXXXPXXPP 880
PP P PP PP PP P P P PP
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPP-LPPSAPIAPPLPAGMPAAPP 468
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +1
Query: 754 PPPXXXPPPPAKXXXPFXPPXPXPPPXXXXPXXXXXXPPXXPP 882
PPP P P PP P P PP PP
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 744 GXXSPPXXXPPPPRXXPXXFXXPXPPPPPXXXXXPPXXXXPPXXP 878
G +PP PPPPR P P P PP PP P
Sbjct: 357 GRSAPP---PPPPRSAPSTGRQPPPLSSSRAVSNPP--APPPAIP 396
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/42 (33%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Frame = +2
Query: 755 PPLXXPPPPPXXXXXLXXP-PPPXPPXXXXXPXXPXXXPXXP 877
PP PP L P PPP PP P P P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/46 (28%), Positives = 14/46 (30%)
Frame = +3
Query: 744 GXXSPPXXXPPPPRXXPXXFXXPXPPPPPXXXXXPPXXXXPPXXPP 881
G + P P P P P PP P PP P P
Sbjct: 442 GAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +3
Query: 753 SPPXXXPPPPRXXPXXFXXPXPPPPPXXXXXPPXXXXPPXXPP 881
+P PP P+ P P PPP P PP PP
Sbjct: 1173 APSSGIPPVPK--PAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 756 PPXXXPPPPRXXPXXFXXPXPPPPPXXXXXPPXXXXPPXXPP 881
PP PP P+ P P PPP P PP P
Sbjct: 1193 PPSEAPPVPK--PSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/45 (31%), Positives = 15/45 (33%), Gaps = 2/45 (4%)
Frame = +2
Query: 755 PPLXXPPP--PPXXXXXLXXPPPPXPPXXXXXPXXPXXXPXXPPP 883
PP+ P PP PP P P P P PPP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 26.2 bits (55), Expect = 6.3
Identities = 18/79 (22%), Positives = 18/79 (22%)
Frame = +1
Query: 646 PXRXXXPPXXPPKXXXPXXXPXXFFXXXRGXXXGXFPPPXXXPPPPAKXXXPFXPPXPXP 825
P PP P P P P P PP PP P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 826 PPXXXXPXXXXXXPPXXPP 882
P PP P
Sbjct: 1137 SGAPPVPKPSVAAPPVPAP 1155
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = -1
Query: 879 GGXXGXXXGXXGXXXXXGGX--GGGGXKRXXXFXGGGGGXXRGG 754
GG G G G GG GG G F GG G RGG
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Frame = +1
Query: 754 PPPXXXPP----PPAKXXXPFXPPXPXPPP 831
PPP PP P + PP P PPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 4/29 (13%)
Frame = +3
Query: 756 PPXXXPP----PPRXXPXXFXXPXPPPPP 830
PP PP P P + P PPPPP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 22.2 bits (45), Expect(2) = 7.3
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +1
Query: 760 PXXXPPPPAKXXXPFXPPXPXPPP 831
P P K P P P PPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
Score = 21.8 bits (44), Expect(2) = 7.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 751 FPPPXXXPPPPA 786
+ PP PPPPA
Sbjct: 187 YNPPPPPPPPPA 198
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +3
Query: 759 PXXXPPPPRXXPXXFXXPXPPPPPXXXXXPPXXXXPP 869
P P PP P PPPPP P P
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 755 PPLXXPPPPPXXXXXLXXPPPPXPPXXXXXPXXPXXXPXXPPP 883
PP+ PPP PP P P P P PPP
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP--PPP 205
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +1
Query: 757 PPXXXPPPPAKXXXPFXPPXPXPPPXXXXPXXXXXXPPXXPP 882
PP PPP+ P P P P P P PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +3
Query: 753 SPPXXXPPPPRXXPXXFXXPXPPPPPXXXXXPPXXXXPPXXPPP 884
SP P P + P P P P PP P PP
Sbjct: 153 SPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
>SPAC27F1.07 |||dolichyl-diphospho-oligosaccharide-protein
glycosyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 437 PIYIFNSFYTKLHRFIHQLEKRACVNSKVSVT 342
P+ I NS TK+H+F+ L ++ ++VT
Sbjct: 376 PVEISNSNVTKIHKFLDTLGRQVFTYEALNVT 407
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,351,591
Number of Sequences: 5004
Number of extensions: 39576
Number of successful extensions: 437
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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