Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_O18
(959 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 34 0.17
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 33 0.30
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 33 0.30
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 33 0.30
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 32 0.53
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 32 0.53
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 32 0.70
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 31 1.6
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 31 1.6
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 31 1.6
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 31 1.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.8
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 3.7
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 3.7
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 3.7
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 3.7
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 3.7
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 3.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.7
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z70208-11|CAA94144.1| 598|Caenorhabditis elegans Hypothetical p... 29 4.9
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 29 4.9
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 29 6.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 6.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 6.5
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 6.5
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 28 8.6
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 28 8.6
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 8.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.6
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +1
Query: 130 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKARP 276
WP ET TT T+ +P TTT+ T T TT + T T A P
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQ-RTTPYTTTTTTTAAP 345
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +1
Query: 130 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKARP 276
WP ET TT T+ +P TTT+ T T TT + T T A P
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQ-RTTPYTTTTTTTAAP 345
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -1
Query: 629 GXGXWAXGGGGXDXXXKVRALXGGGXXGWGGPEXSRXG 516
G G GG G D GGG GWGGP+ + G
Sbjct: 243 GPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGG 280
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -1
Query: 629 GXGXWAXGGGGXDXXXKVRALXGGGXXGWGGPEXSRXG 516
G G GG G D GGG GWGGP+ + G
Sbjct: 205 GPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGG 242
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -1
Query: 629 GXGXWAXGGGGXDXXXKVRALXGGGXXGWGGPEXSRXG 516
G G GG G D GGG GWGGP+ + G
Sbjct: 243 GPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGG 280
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 32.3 bits (70), Expect = 0.53
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = +1
Query: 133 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 264
PT + T T TT T+ P TTT ET T +TT T T P
Sbjct: 112 PTTETTTTPTTTTPTTTTTTPTTTTT-ETTTTPTTTTTETTTTP 154
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 136 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHI-TWTVP 264
T T T TT T+ +P TTT T T +TT T T P
Sbjct: 198 TTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTP 241
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +1
Query: 136 TLKETATNLLTTARTSLILPKTTTLM-ETATNLSTTVHITWTVPKARPYFKPT 291
T T T TT T+ P TTT T T TT T T P PT
Sbjct: 69 TTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPT 121
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 133 PTLKETA-TNLLTTARTSLILPKTTTLM-ETATNLSTTVHITWTVP 264
PT TA T TT T+ P TTT + T T TT T T P
Sbjct: 189 PTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTP 234
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 32.3 bits (70), Expect = 0.53
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 118 LCWLWPTLKETATNLLTTARTSLILPKTTT---LMETATNLSTTVHITWTVP 264
LC+LW L T T TT T+ + TTT + T T T T TVP
Sbjct: 179 LCYLWVPLTTTTTTTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVP 230
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 31.9 bits (69), Expect = 0.70
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +1
Query: 133 PTLKETATNLLTTARTSLILPKTTTLMET---ATNLSTTVHITWTVPKARPY---FKPTP 294
PT AT +TT T+ P TTT+ T A ++TT I TVP + + KP P
Sbjct: 191 PTTTTIATTRITTKTTTSPPPFTTTVTTTTSAARTIATTTPIK-TVPPVKVFGKAIKPIP 249
Query: 295 FPG 303
PG
Sbjct: 250 TPG 252
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +1
Query: 136 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 264
T T T TT+ T+ P TTT T STT T T P
Sbjct: 60 TTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/56 (37%), Positives = 22/56 (39%)
Frame = +1
Query: 133 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKARPYFKPTPFP 300
PT T T TT+ TS TTT T STT T T A P T P
Sbjct: 79 PTTTTTTTPTTTTSTTS-----TTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMP 129
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 148 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKARP 276
T+T TT T TTT T T +T T T+P P
Sbjct: 91 TSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMPPCNP 133
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +1
Query: 532 SGPPXPXXPPPXXALTLXXXSMPPPPXAHXPXPXX*XXXXXXXXXXXLXPPP 687
S PP P PPP + PPPP A P P + PPP
Sbjct: 175 SAPPPPR-PPPQEPPKPVEQAAPPPPPAPMPVPVEKAPEPVPAPVEQIAPPP 225
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 638 YXXGXGXWAXGGGGXDXXXKVRALXGGGXXGWG 540
Y G W GGG R GGG GWG
Sbjct: 72 YGGRGGGWGGRGGGWGRGGGGRGFYGGGRRGWG 104
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/57 (29%), Positives = 20/57 (35%)
Frame = -1
Query: 686 GGGXRXXXXXXXXXXGYXXGXGXWAXGGGGXDXXXKVRALXGGGXXGWGGPEXSRXG 516
GGG Y G G GG + GGG GWGGP+ + G
Sbjct: 187 GGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGG 243
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/57 (29%), Positives = 20/57 (35%)
Frame = -1
Query: 686 GGGXRXXXXXXXXXXGYXXGXGXWAXGGGGXDXXXKVRALXGGGXXGWGGPEXSRXG 516
GGG Y G G GG + GGG GWGGP+ + G
Sbjct: 225 GGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGG 281
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/58 (29%), Positives = 21/58 (36%)
Frame = +1
Query: 457 PPYXGRXSPFSEXXLXPXXIPXLXXSGPPXPXXPPPXXALTLXXXSMPPPPXAHXPXP 630
PP R P + P P + G P PPP + PPPP + P P
Sbjct: 319 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP--PPPPRYPSAGPGMYPPPPPSRPPAP 374
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/58 (29%), Positives = 21/58 (36%)
Frame = +1
Query: 457 PPYXGRXSPFSEXXLXPXXIPXLXXSGPPXPXXPPPXXALTLXXXSMPPPPXAHXPXP 630
PP R P + P P + G P PPP + PPPP + P P
Sbjct: 329 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP--PPPPRYPSAGPGMYPPPPPSRPPAP 384
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +1
Query: 457 PPYXGRXSPFSEXXLXPXXIPXLXXSGPPXPXXPPPXXALTLXXXSMPPPPXAHXPXP 630
PP G SP P PP PPP A PPPP A P P
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA-----GGSPPPPRAGSPPP 299
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 532 SGPPXPXXPPPXXALTLXXXSMPPPPXAHXPXP 630
+G P P PP S PPPP A P P
Sbjct: 234 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP 266
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +1
Query: 457 PPYXGRXSPFSEXXLXPXXIPXLXXSGPPXPXXPPPXXALTLXXXSMPPPPXAHXPXP 630
PP G SP P PP PPP A PPPP A P P
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA-----GGSPPPPRAGSPPP 320
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 532 SGPPXPXXPPPXXALTLXXXSMPPPPXAHXPXP 630
+G P P PP S PPPP A P P
Sbjct: 255 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP 287
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +1
Query: 457 PPYXGRXSPFSEXXLXPXXIPXLXXSGPPXPXXPPPXXALTLXXXSMPPPPXAHXPXP 630
PP G SP P PP PPP A PPPP A P P
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA-----GGSPPPPRAGSPPP 305
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 532 SGPPXPXXPPPXXALTLXXXSMPPPPXAHXPXP 630
+G P P PP S PPPP A P P
Sbjct: 240 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP 272
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +1
Query: 538 PPXPXXPPPXXALTLXXXSMPPPPXAHXPXPXX*XXXXXXXXXXXLXPPPXTG 696
PP P PPP T+ PP + P P PPP G
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +1
Query: 538 PPXPXXPPPXXALTLXXXSMPPPPXAHXPXPXX*XXXXXXXXXXXLXPPPXTG 696
PP P PPP T+ PP + P P PPP G
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPPGG 818
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +1
Query: 148 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKARPYFKPTP 294
T T +T T+ P TTT E L+T TWT P + TP
Sbjct: 632 TTTTTTSTTATTTPQPTTTTTSEKPVTLTTQ---TWTAPPTTTVKRTTP 677
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +1
Query: 148 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKARPYFKPTP 294
T T +T T+ P TTT E L+T TWT P + TP
Sbjct: 632 TTTTTTSTTATTTPQPTTTTTSEKPVTLTTQ---TWTAPPTTTVKRTTP 677
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 532 SGPPXPXXPPPXXALTLXXXSMPPPPXAHXP 624
S PP P PPP + PPPP P
Sbjct: 153 SAPPPPPPPPPVSVPSSKPTPPPPPPAQQKP 183
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 532 SGPPXPXXPPPXXALTLXXXSMPPPPXAHXP 624
S PP P PPP + PPPP P
Sbjct: 153 SAPPPPPPPPPVSVPSSKPTPPPPPPAQQKP 183
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.5 bits (63), Expect = 3.7
Identities = 25/90 (27%), Positives = 27/90 (30%), Gaps = 7/90 (7%)
Frame = +1
Query: 469 GRXSPFSEXXLXPXXIPXLXXSGPPX--PXXPP-----PXXALTLXXXSMPPPPXAHXPX 627
G PF E L GPP P PP P + PPPP H P
Sbjct: 247 GALVPFDEPLRRAGSDNDLSYRGPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPP 306
Query: 628 PXX*XXXXXXXXXXXLXPPPXTGXXVXRXF 717
P + PPP G R F
Sbjct: 307 PPP-HFMGRGMPPPFMPPPPHFGMGPPRGF 335
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.5 bits (63), Expect = 3.7
Identities = 25/90 (27%), Positives = 27/90 (30%), Gaps = 7/90 (7%)
Frame = +1
Query: 469 GRXSPFSEXXLXPXXIPXLXXSGPPX--PXXPP-----PXXALTLXXXSMPPPPXAHXPX 627
G PF E L GPP P PP P + PPPP H P
Sbjct: 247 GALVPFDEPLRRAGSDNDLSYRGPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPP 306
Query: 628 PXX*XXXXXXXXXXXLXPPPXTGXXVXRXF 717
P + PPP G R F
Sbjct: 307 PPP-HFMGRGMPPPFMPPPPHFGMGPPRGF 335
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 538 PPXPXXPPPXXALTLXXXSMPPPP 609
PP P PPP LT PPPP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPP 1363
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/53 (35%), Positives = 22/53 (41%)
Frame = +1
Query: 136 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKARPYFKPTP 294
T T T TT T+ P TTT T T +TT T T P + TP
Sbjct: 90 TTTTTPTTTTTTPTTTTTTPTTTTTTPTTT--TTTPTTTTTTPTTTTTTRSTP 140
>Z70208-11|CAA94144.1| 598|Caenorhabditis elegans Hypothetical
protein F54B11.11 protein.
Length = 598
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +1
Query: 169 TARTSLILPKTTTLMETATNLSTTVHITWTVP----KARPYFKPTPF 297
T+ T+ L TTT+ T N+ TT T T P A + P PF
Sbjct: 480 TSSTTKTLTSTTTITTTKANILTTTATTTTPPVTSAPATTFITPVPF 526
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 608 GGGGXDXXXKVRALXGGGXXGWGGPEXSRXG 516
GGGG GGG G+GGP+ G
Sbjct: 265 GGGGGGMNVGAAGFGGGGGQGYGGPQFGGQG 295
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +1
Query: 148 TATNLLTTARTSLILPKTTTLMETATNL-STTVHITWTVPKARPYFKPT 291
T T TT TS P TTT T T STT T T+ PT
Sbjct: 297 TTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTPT 345
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +1
Query: 136 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKARP 276
T A N+ TT T+ I P T T T +TTV T T P P
Sbjct: 31 TTTSPAPNITTTTTTTTIAPPTNTTTTILTT-TTTVTTTTTSPPLIP 76
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 532 SGPPXPXXPPPXXALTLXXXSMPPPPXAHXP 624
S P P PPP L PPPP P
Sbjct: 627 SAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 532 SGPPXPXXPPPXXALTLXXXSMPPPPXAHXP 624
S P P PPP L PPPP P
Sbjct: 453 SAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = -1
Query: 686 GGGXRXXXXXXXXXXGYXXGXGXWAXGGGGXDXXXKVRALXGGGXXG--WGGPEXSRXG 516
GGG G+ G G GGGG + V +L GGG G +GG ++ G
Sbjct: 57 GGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQGG 115
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical protein
F43C1.1 protein.
Length = 1036
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 541 PXPXXPPPXXALTLXXXSMPPPPXAHXPXP 630
P P PPP A+ S PPPP P
Sbjct: 943 PSPPVPPPIPAIRHRTPSPPPPPLPSSTPP 972
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.3 bits (60), Expect = 8.6
Identities = 23/76 (30%), Positives = 24/76 (31%)
Frame = -1
Query: 686 GGGXRXXXXXXXXXXGYXXGXGXWAXGGGGXDXXXKVRALXGGGXXGWGGPEXSRXGIXX 507
GGG G G G W GGG + R GGG G GG R G
Sbjct: 58 GGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGG-RGGGGGGGGGRGGGGGGRGGGGG 116
Query: 506 GXXXXSLKGDXRPXXG 459
G G R G
Sbjct: 117 GGGGRGGGGGGRGGGG 132
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 133 PTLKETATNLLTTARTSLILPKTTTLMET--ATNLSTTVHITWTV 261
PT+ T T ++TT T + +P T + T TN ST V TV
Sbjct: 361 PTVATTPTTVVTTPSTVVTVPSTVVTVPTTVVTNPSTVVTAPSTV 405
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +1
Query: 481 PFSEXXLXPXXIPXLXXSGPPXPXXPPPXXALTLXXXSMPPPPXAHXP 624
P S P L +G P PPP L PPPP P
Sbjct: 537 PVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPP 584
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,275,529
Number of Sequences: 27780
Number of extensions: 268073
Number of successful extensions: 1308
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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