Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_O15
         (897 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_1025 - 10506144-10506226,10506643-10506699,10507502-105076...    32   0.71 
03_02_0599 - 9730204-9730314,9730766-9731549,9731631-9732051,973...    29   6.6  
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624...    29   6.6  
11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-85...    28   8.8  
07_01_0493 - 3715677-3715907,3716675-3716861,3717631-3717818           28   8.8  
05_04_0123 + 18210069-18213737                                         28   8.8  

>12_01_1025 -
           10506144-10506226,10506643-10506699,10507502-10507605,
           10507884-10507937,10508107-10508193,10509027-10509214,
           10509793-10509854,10510084-10510354,10510756-10510834,
           10511715-10511913,10512816-10512960,10513324-10513416,
           10514449-10514736
          Length = 569

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 434 ETFYKTACFARVHLNQGQFLYAF-YIAVIQRSDCHGF 541
           ETF+ TAC  R HL QG+ + A+ Y+   +  DC GF
Sbjct: 427 ETFFTTACMGRGHLCQGKLVDAYRYLHKEKDMDC-GF 462


>03_02_0599 -
           9730204-9730314,9730766-9731549,9731631-9732051,
           9732139-9732385,9733730-9733921,9734071-9734204,
           9734316-9734477,9736162-9736200,9737507-9737825
          Length = 802

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = -2

Query: 608 NFLQHFHIHKHFRVYFIRSQEQRNRGNQSAG*QRCRRHTRIDLD*DAHAQN 456
           +F+QH H H H+ V+ +  Q+Q+    + +   +C      D   + HA N
Sbjct: 633 SFMQHHH-HVHYYVHVMTQQQQQPSIERGSSDAQCGSSNVFDPPIEGHAAN 682


>03_02_0186 -
           6243487-6243799,6243892-6244400,6244495-6244557,
           6245482-6245681,6246125-6246519,6246776-6246888
          Length = 530

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = +1

Query: 451 CLFCACASQSRSILVCLLHRCYPA 522
           CLFC     SR ILVC L RC  A
Sbjct: 58  CLFCEANFISRRILVCDLLRCLVA 81


>11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-852260,
            852330-852409,852506-852848,853068-853166,853240-853360,
            853567-853723,853976-854099,855275-855368,855866-857259,
            857882-857924,858240-858458,859379-859605,859701-859948,
            860246-860552,860725-861153
          Length = 1486

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 659  LSCGFRINEAILHLCYVNFLQHFHIHKHFRVYFIR 555
            L  GFR++ A+ +LC + +L+   I K  R   IR
Sbjct: 1002 LKAGFRLSSALFYLCNILWLRAVKIRKKLRRQGIR 1036


>07_01_0493 - 3715677-3715907,3716675-3716861,3717631-3717818
          Length = 201

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = -3

Query: 574 LGYTSYGARNNETVAIRALDNSDVEGIQELTLIEMHTRKTGSLVERFKVLSVIE*ME*SN 395
           LG T   ARNN  +  R      +EG++  TL+  H   T    E    L +I  +E +N
Sbjct: 131 LGTTPKTARNNR-IHERGAQALGIEGVRAFTLVGWHLLPTNEQAEHGDHLPIIPIVEAAN 189


>05_04_0123 + 18210069-18213737
          Length = 1222

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
 Frame = -3

Query: 739 SSLLYKTAVRIIGLCKRSSRFPL*MPYLAAASGLMRPSCIFVT*IFCSTSIFINILGYTS 560
           +S LY   V I+  C+R +  P  M ++ +   +    C  +T +       IN+   T 
Sbjct: 612 ASALYNLQVLILNRCRRLTHLPDGMKFMISLRHVYLDDCARLTSMPAGLGQLINLRTLTK 671

Query: 559 YGARNNETVAIRALDNSDVEG-IQELTLIEM 470
           +   N     I  L++  + G +Q   LI++
Sbjct: 672 FVPGNESGYRINELNDLKLGGKLQIFNLIKV 702


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,059,637
Number of Sequences: 37544
Number of extensions: 399154
Number of successful extensions: 885
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)