Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_O14
         (899 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein.        30   2.6  
U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryo...    30   2.6  
U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryo...    30   2.6  
U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryo...    30   2.6  

>U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein.
          Length = 1379

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = -3

Query: 741  SWSGFATFDLSVDFWDARQGGGAYGKTPATRPFYGSWP 628
            S  G A +    + W A  GGGA G  P  +  YGS P
Sbjct: 1219 SGRGNADYHHMFNSWFAYTGGGAVGAAPVIKSSYGSSP 1256


>U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryonic
            partitioningof cytoplasm protein 3, isoform c protein.
          Length = 1340

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = -3

Query: 741  SWSGFATFDLSVDFWDARQGGGAYGKTPATRPFYGSWP 628
            S  G A +    + W A  GGGA G  P  +  YGS P
Sbjct: 1180 SGRGNADYHHMFNSWFAYTGGGAVGAAPVIKSSYGSSP 1217


>U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryonic
            partitioningof cytoplasm protein 3, isoform a protein.
          Length = 1376

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = -3

Query: 741  SWSGFATFDLSVDFWDARQGGGAYGKTPATRPFYGSWP 628
            S  G A +    + W A  GGGA G  P  +  YGS P
Sbjct: 1216 SGRGNADYHHMFNSWFAYTGGGAVGAAPVIKSSYGSSP 1253


>U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryonic
            partitioningof cytoplasm protein 3, isoform b protein.
          Length = 1379

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = -3

Query: 741  SWSGFATFDLSVDFWDARQGGGAYGKTPATRPFYGSWP 628
            S  G A +    + W A  GGGA G  P  +  YGS P
Sbjct: 1219 SGRGNADYHHMFNSWFAYTGGGAVGAAPVIKSSYGSSP 1256


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,859,801
Number of Sequences: 27780
Number of extensions: 307234
Number of successful extensions: 686
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)