Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_O06
(927 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58728-5|AAB00591.1| 277|Caenorhabditis elegans Surfeit homolog... 132 3e-31
Y14949-1|CAA75173.1| 277|Caenorhabditis elegans SURF-4 protein ... 130 1e-30
Z81581-7|CAB04659.1| 269|Caenorhabditis elegans Hypothetical pr... 62 5e-10
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 40 0.003
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 39 0.004
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 36 0.031
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 33 0.22
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 33 0.22
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 31 1.2
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 31 1.2
AF067213-1|AAC17000.2| 462|Caenorhabditis elegans Hypothetical ... 31 1.2
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 31 1.2
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 31 1.2
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 31 1.5
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 30 2.0
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 30 2.7
AL132860-6|CAB60526.1| 373|Caenorhabditis elegans Hypothetical ... 30 2.7
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 30 2.7
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 4.7
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 4.7
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 29 6.2
AC006777-7|AAK72306.2| 367|Caenorhabditis elegans Seven tm rece... 28 8.2
>U58728-5|AAB00591.1| 277|Caenorhabditis elegans Surfeit homolog
protein 4 protein.
Length = 277
Score = 132 bits (319), Expect = 3e-31
Identities = 59/114 (51%), Positives = 79/114 (69%)
Frame = +3
Query: 159 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSXGCGK 338
NE ++ AED A+ RK + LP +ARLCL+STFLEDG+RM+FQW +Q+ +M S CG
Sbjct: 11 NEMLAKAEDAAEDFFRKTRTYLPHIARLCLVSTFLEDGIRMYFQWDDQKQFMQESWSCGW 70
Query: 339 FLATMFVIVNLFGQLGGCVMVLGRLXVDIACGVLXXIVVLXTFXYXILWDVXXL 500
F+AT+FVI N FGQ +M++ R V +ACG+L IV+L T Y ILWD+ L
Sbjct: 71 FIATLFVIYNFFGQFIPVLMIMLRKKVLVACGILASIVILQTIAYHILWDLKFL 124
>Y14949-1|CAA75173.1| 277|Caenorhabditis elegans SURF-4 protein
protein.
Length = 277
Score = 130 bits (314), Expect = 1e-30
Identities = 58/114 (50%), Positives = 78/114 (68%)
Frame = +3
Query: 159 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSXGCGK 338
NE ++ ED A+ RK + LP +ARLCL+STFLEDG+RM+FQW +Q+ +M S CG
Sbjct: 11 NEMLAKREDAAEDFFRKTRTYLPHIARLCLVSTFLEDGIRMYFQWDDQKQFMQESWSCGW 70
Query: 339 FLATMFVIVNLFGQLGGCVMVLGRLXVDIACGVLXXIVVLXTFXYXILWDVXXL 500
F+AT+FVI N FGQ +M++ R V +ACG+L IV+L T Y ILWD+ L
Sbjct: 71 FIATLFVIYNFFGQFIPVLMIMLRKKVLVACGILASIVILQTIAYHILWDLKFL 124
>Z81581-7|CAB04659.1| 269|Caenorhabditis elegans Hypothetical
protein T02E1.7 protein.
Length = 269
Score = 62.1 bits (144), Expect = 5e-10
Identities = 37/129 (28%), Positives = 60/129 (46%)
Frame = +3
Query: 159 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSXGCGK 338
N ++ ED + + R + VLPT+ RL LISTF+EDGLR+ F + ++ + G
Sbjct: 4 NVVITRCEDYTETLARNTRKVLPTIGRLLLISTFVEDGLRLLFNTHDHVNHFSYNWGLNY 63
Query: 339 FLATMFVIVNLFGQLGGCVMVLGRLXVDIACGVLXXIVVLXTFXYXILWDVXXLLPPXXP 518
+ IV + L G + V+ R V + VL + Y L+ LL
Sbjct: 64 HFSLFLTIVMIINLLFGSLFVMMRYKVTESSAVLGFTIFAQVILYQ-LYTTYHLLTRNIS 122
Query: 519 XIXAXLLVL 545
+ A +L++
Sbjct: 123 IVAAIMLLV 131
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 39.9 bits (89), Expect = 0.003
Identities = 24/61 (39%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = -3
Query: 916 GXXGGGEXW-EGGX*GGPGXXRRXGW*QKWGGXSRGEXGXXGXPGLVAGXGGXXXNIRXG 740
G GGG W GG G G R GW GG + G G G G G GG R G
Sbjct: 47 GWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGG 106
Query: 739 G 737
G
Sbjct: 107 G 107
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/53 (41%), Positives = 22/53 (41%)
Frame = -3
Query: 922 GEGXXGGGEXWEGGX*GGPGXXRRXGW*QKWGGXSRGEXGXXGXPGLVAGXGG 764
G G GGG W GG GG G G WGG G G G G G GG
Sbjct: 54 GWGRGGGGSGWGGGRGGGWGNNGGGG---NWGGNGGGGNGGGGRGGGGGGGGG 103
Score = 37.5 bits (83), Expect = 0.013
Identities = 25/64 (39%), Positives = 25/64 (39%)
Frame = -3
Query: 922 GEGXXGGGEXWEGGX*GGPGXXRRXGW*QKWGGXSRGEXGXXGXPGLVAGXGGXXXNIRX 743
G G GGG W G GG G R G GG G G G G G GG R
Sbjct: 71 GWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGG-RG 129
Query: 742 GGXR 731
GG R
Sbjct: 130 GGGR 133
Score = 32.3 bits (70), Expect = 0.51
Identities = 32/97 (32%), Positives = 32/97 (32%)
Frame = -3
Query: 916 GXXGGGEXWEGGX*GGPGXXRRXGW*QKWGGXSRGEXGXXGXPGLVAGXGGXXXNIRXGG 737
G GG G GGPG R G WGG G G G G G GG GG
Sbjct: 37 GGRSGGWGRPGWGGGGPGWGRGGGG-SGWGGGRGGGWGNNGGGGNWGGNGGGG---NGGG 92
Query: 736 XRRXXVVXMGRNXELXKWXGXWRNMEGXXGWXXGGGG 626
R G G R G G GGGG
Sbjct: 93 GRGGG----GGGGGGRGGGGGGRGGGGGGGGGRGGGG 125
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 39.1 bits (87), Expect = 0.004
Identities = 33/106 (31%), Positives = 36/106 (33%), Gaps = 2/106 (1%)
Frame = -3
Query: 922 GEGXXGGGEXWEGGX*GGPGXXRRXGW*QKWGGXS--RGEXGXXGXPGLVAGXGGXXXNI 749
G G GGG GG GG G WGG RG+ G G G G G
Sbjct: 48 GWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGN 107
Query: 748 RXGGXRRXXVVXMGRNXELXKWXGXWRNMEGXXGWXXGGGGKEXXG 611
GG G N + G W G G GGGG+ G
Sbjct: 108 NNGGGGNW---GGGGNND-----GGWGGNNGGGGGGRGGGGRGGDG 145
Score = 37.9 bits (84), Expect = 0.010
Identities = 35/119 (29%), Positives = 37/119 (31%), Gaps = 7/119 (5%)
Frame = -3
Query: 916 GXXGGGEXWEGGX*GGPGXXRRXGW*Q-------KWGGXSRGEXGXXGXPGLVAGXGGXX 758
G GG GG GG G GW + WGG + G G G GG
Sbjct: 33 GGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNG 92
Query: 757 XNIRXGGXRRXXVVXMGRNXELXKWXGXWRNMEGXXGWXXGGGGKEXXGVVXXGGXXXP 581
R GG R N W G N G G GGGG G G P
Sbjct: 93 GGGRGGGGRGDW--GGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPP 149
Score = 33.5 bits (73), Expect = 0.22
Identities = 33/99 (33%), Positives = 35/99 (35%), Gaps = 1/99 (1%)
Frame = -3
Query: 886 GGX*GGPGXXRRXGW*QKWGGXSRGEXGXXGXPGLVAGXGGXXXNIRXGGXRRXXVVXMG 707
GG GGPG +WGG G G PG GG R GG R G
Sbjct: 23 GGWGGGPG---------RWGGWGGNRWGGGGGPGGWGNNGGGGWG-RGGG--RGGGDWGG 70
Query: 706 RNXELXKWXGXWRNMEGXXGW-XXGGGGKEXXGVVXXGG 593
N W G N G W GGGG+ G GG
Sbjct: 71 NNGGGGNWGG---NGGGRGDWGGNGGGGRGGGGRGDWGG 106
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 36.3 bits (80), Expect = 0.031
Identities = 31/110 (28%), Positives = 35/110 (31%), Gaps = 2/110 (1%)
Frame = -3
Query: 916 GXXGGGEXWEGGX*GGPGXXRRXGW*QKWGGXSRGEXG--XXGXPGLVAGXGGXXXNIRX 743
G GGG GG G GW + GG S G G G G +G G
Sbjct: 69 GGSGGGRGGSGGAGAGGSGSGSGGWGGQDGGSSAGGWGGSQGGSQGGSSGGWGGSSRSDS 128
Query: 742 GGXRRXXVVXMGRNXELXKWXGXWRNMEGXXGWXXGGGGKEXXGVVXXGG 593
G + G N W G G G G GG+ G GG
Sbjct: 129 GSGQGGWGGQQGGNSNAGGWGGSQGGQNGGGG-RGGSGGQGGWGGSQDGG 177
Score = 31.1 bits (67), Expect = 1.2
Identities = 29/110 (26%), Positives = 37/110 (33%), Gaps = 2/110 (1%)
Frame = -3
Query: 916 GXXGGGEXWEGGX*GGPGXXRRXGW*QKWGGXSRGEXG--XXGXPGLVAGXGGXXXNIRX 743
G GG + + G G G + GW G S+G G G G G GG +
Sbjct: 146 GGWGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQG 205
Query: 742 GGXRRXXVVXMGRNXELXKWXGXWRNMEGXXGWXXGGGGKEXXGVVXXGG 593
G + G W N G G G GG++ G GG
Sbjct: 206 GEQGGWGGQGGSQGGSQGGSQGGWGNQGGQQG--GGRGGQQGPGGWGGGG 253
Score = 29.5 bits (63), Expect = 3.6
Identities = 25/83 (30%), Positives = 29/83 (34%)
Frame = -3
Query: 919 EGXXGGGEXWEGGX*GGPGXXRRXGW*QKWGGXSRGEXGXXGXPGLVAGXGGXXXNIRXG 740
+G GG +GG GG + GW + G G G G PG G GG G
Sbjct: 204 QGGEQGGWGGQGGSQGGSQGGSQGGWGNQGGQQGGGRGGQQG-PG---GWGGGGRGGGWG 259
Query: 739 GXRRXXVVXMGRNXELXKWXGXW 671
G R GR W W
Sbjct: 260 GWGRGSRWGWGR-PSWGGWGRGW 281
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Frame = +2
Query: 584 AXXPXXXNHPXXLLATSARXPSXXPLH-VP---PXPXPFXQFXIPAHX--YHXPPPXPSX 745
A P ++P + A P+ P H VP P P P+ Q +PA PPP P
Sbjct: 79 APAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPP 138
Query: 746 TNIXXPP 766
+ PP
Sbjct: 139 PHYPPPP 145
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 33.5 bits (73), Expect = 0.22
Identities = 23/57 (40%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -3
Query: 922 GEGXXGGGEXW-EGGX*GGPGXXR---RXGW*QKWGGXSRGEXGXXGXPGLVAGXGG 764
G G GGG + GG GG G R R GW GG G G G G G GG
Sbjct: 217 GGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGGG 273
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Frame = -3
Query: 904 GGEXWEGGX*GGPGXXRRXGW*QKWGGXSR---GEXGXXGXPGLVAGXGGXXXNIRXGGX 734
GG GG GG G GW GG R G G G G G GG GG
Sbjct: 213 GGSGGGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGG 272
Query: 733 RR 728
R
Sbjct: 273 GR 274
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/51 (41%), Positives = 23/51 (45%)
Frame = -3
Query: 916 GXXGGGEXWEGGX*GGPGXXRRXGW*QKWGGXSRGEXGXXGXPGLVAGXGG 764
G GGG+ GG GG G R G+ GG RG G G P G GG
Sbjct: 44 GSFGGGD--RGGFRGGRGGGDRGGFRGGRGGGDRGGFGGRGSPR--GGFGG 90
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/62 (35%), Positives = 23/62 (37%)
Frame = -3
Query: 922 GEGXXGGGEXWEGGX*GGPGXXRRXGW*QKWGGXSRGEXGXXGXPGLVAGXGGXXXNIRX 743
G G GG GG GG G R G+ GG RG G G G GG
Sbjct: 12 GGGFRGGRGGDRGGSRGGFGGGGRGGY----GGGDRGSFGGGDRGGFRGGRGGGDRGGFR 67
Query: 742 GG 737
GG
Sbjct: 68 GG 69
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 31.1 bits (67), Expect = 1.2
Identities = 31/112 (27%), Positives = 41/112 (36%), Gaps = 10/112 (8%)
Frame = -3
Query: 916 GXXGGGEXWEG-------GX*GGPGXXRRXGW*QKWGG--XSRGEXGXXGXPGLVAGXGG 764
G GGG W G G GGPG + G+ +GG +G G G G GG
Sbjct: 221 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGG 280
Query: 763 XXXNIRXGGXRRXXVVXMGRNXELXKWXGXWRN-MEGXXGWXXGGGGKEXXG 611
+ GG + G + G W +G G GG G++ G
Sbjct: 281 GGWGQQGGGGQG------GWGGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGG 326
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/101 (26%), Positives = 32/101 (31%), Gaps = 4/101 (3%)
Frame = -3
Query: 916 GXXGGGEXWEGGX*GGPGXXRRXGW*QKWGGXSR----GEXGXXGXPGLVAGXGGXXXNI 749
G GGG+ GG GG + G WGG + G G G G G GG
Sbjct: 243 GPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGG-QGGWGGPQQQQ 301
Query: 748 RXGGXRRXXVVXMGRNXELXKWXGXWRNMEGXXGWXXGGGG 626
+ G G + G W G W GG
Sbjct: 302 QGGWGGPQQGGGGGGWGGQGQQQGGWGGQSGAQQWAHAQGG 342
>AF067213-1|AAC17000.2| 462|Caenorhabditis elegans Hypothetical
protein T25B2.2 protein.
Length = 462
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = -3
Query: 274 RPSSRNVDIRHSRATVGKTFLPFRIT*SATSSAVDTYSLGICIFHAEHSTNTEKRNLTES 95
RP+SR +R R +V + L R+T + + T +LG +T ++N
Sbjct: 82 RPASRRDSVRSRRPSVAEILLDSRVTKATDDCVMVTQTLG------TSTTLFFQKNPLVD 135
Query: 94 EIQVVTSLVGRPLSN-DQNLKEFPIVRW 14
+ + S + R L N D ++KE P +++
Sbjct: 136 NLDLRPSAIERGLYNFDDSIKEIPPIKY 163
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 31.1 bits (67), Expect = 1.2
Identities = 31/112 (27%), Positives = 41/112 (36%), Gaps = 10/112 (8%)
Frame = -3
Query: 916 GXXGGGEXWEG-------GX*GGPGXXRRXGW*QKWGG--XSRGEXGXXGXPGLVAGXGG 764
G GGG W G G GGPG + G+ +GG +G G G G GG
Sbjct: 183 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGG 242
Query: 763 XXXNIRXGGXRRXXVVXMGRNXELXKWXGXWRN-MEGXXGWXXGGGGKEXXG 611
+ GG + G + G W +G G GG G++ G
Sbjct: 243 GGWGQQGGGGQG------GWGGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGG 288
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/101 (26%), Positives = 32/101 (31%), Gaps = 4/101 (3%)
Frame = -3
Query: 916 GXXGGGEXWEGGX*GGPGXXRRXGW*QKWGGXSR----GEXGXXGXPGLVAGXGGXXXNI 749
G GGG+ GG GG + G WGG + G G G G G GG
Sbjct: 205 GPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGG-QGGWGGPQQQQ 263
Query: 748 RXGGXRRXXVVXMGRNXELXKWXGXWRNMEGXXGWXXGGGG 626
+ G G + G W G W GG
Sbjct: 264 QGGWGGPQQGGGGGGWGGQGQQQGGWGGQSGAQQWAHAQGG 304
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 31.1 bits (67), Expect = 1.2
Identities = 31/112 (27%), Positives = 41/112 (36%), Gaps = 10/112 (8%)
Frame = -3
Query: 916 GXXGGGEXWEG-------GX*GGPGXXRRXGW*QKWGG--XSRGEXGXXGXPGLVAGXGG 764
G GGG W G G GGPG + G+ +GG +G G G G GG
Sbjct: 221 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGG 280
Query: 763 XXXNIRXGGXRRXXVVXMGRNXELXKWXGXWRN-MEGXXGWXXGGGGKEXXG 611
+ GG + G + G W +G G GG G++ G
Sbjct: 281 GGWGQQGGGGQG------GWGGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGG 326
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/101 (26%), Positives = 32/101 (31%), Gaps = 4/101 (3%)
Frame = -3
Query: 916 GXXGGGEXWEGGX*GGPGXXRRXGW*QKWGGXSR----GEXGXXGXPGLVAGXGGXXXNI 749
G GGG+ GG GG + G WGG + G G G G G GG
Sbjct: 243 GPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGG-QGGWGGPQQQQ 301
Query: 748 RXGGXRRXXVVXMGRNXELXKWXGXWRNMEGXXGWXXGGGG 626
+ G G + G W G W GG
Sbjct: 302 QGGWGGPQQGGGGGGWGGQGQQQGGWGGQSGAQQWAHAQGG 342
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 644 PSXXPLHVPPXPX--PFXQFXIPAHXYHXPPPXPSXTNIXXPPALTRXQP 787
PS P +PP P PF P H YH P P PP QP
Sbjct: 57 PSLPPSTMPPGPHGMPFMGGPPPHHQYHLQYPPPHGLGPPPPPPHYYTQP 106
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -3
Query: 916 GXXGGGEXWEGGX*GGPGXXRRXGW*QKWGGXSRGEXGXXGXPG 785
G GGG + GG GG G R G GG RG G G G
Sbjct: 5 GGRGGGGGFRGGRGGGGGGGFRGGRGGDRGGGFRGGRGGFGGGG 48
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = -3
Query: 907 GGGEXWEGGX*GGPGXXRRXGW*QKWGGXSRGEXGXXGXPGLVAGXGGXXXNIRXG 740
GGG GG GG G G + G RG G G G GG I G
Sbjct: 112 GGGRGGNGGGRGGTGGFGDNGGGRGGNGGGRGGNGGGNNGGGRGGNGGGRPQISAG 167
>AL132860-6|CAB60526.1| 373|Caenorhabditis elegans Hypothetical
protein Y56A3A.9 protein.
Length = 373
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +3
Query: 741 PXRILXXXPPXPATNPGXPXXPCSPLLXPPHFCYHP 848
P + PP P PG P +PL PP C HP
Sbjct: 20 PAALFLDQPP-PQDLPGLQDPPLTPLPLPPLLCPHP 54
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Frame = -3
Query: 466 NVCNTTMXXSTPQAISTLSLPSTITHPP--N*PNKFTITNIVARNLPQPQDMSM*SLCSD 293
++ T S P + + LP+T+T P + T T + P+P +C
Sbjct: 117 HIPTTVTTTSIPTTVPSTQLPTTVTTTPIPTTTTRKTTTTTLRPTKPRPMTKPRVKVCPY 176
Query: 292 HWNHMRRPSSR 260
W RPS +
Sbjct: 177 GWATFNRPSGK 187
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.1 bits (62), Expect = 4.7
Identities = 30/100 (30%), Positives = 33/100 (33%), Gaps = 1/100 (1%)
Frame = -3
Query: 922 GEGXXGGGEXWEGGX*GGPGXXRRXGW*QKWGGXSRGEXGXXGXPGLVAGXGGXXXNIR- 746
G G GGG GG GG G GG G G G G G GG N
Sbjct: 69 GNGGFGGGGGGSGGGGGGNNIGSLVGS-LIGGGGGGGNYGGGG--GNQGGGGGGGFNFND 125
Query: 745 XGGXRRXXVVXMGRNXELXKWXGXWRNMEGXXGWXXGGGG 626
GG G G + ++ G G GGGG
Sbjct: 126 IGGLINSMGGGGGGGQRQGGGGGGFGDILGGIGSLIGGGG 165
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/62 (33%), Positives = 24/62 (38%)
Frame = -3
Query: 922 GEGXXGGGEXWEGGX*GGPGXXRRXGW*QKWGGXSRGEXGXXGXPGLVAGXGGXXXNIRX 743
G+G GGG + GG GG G GG G G G G+ G GG
Sbjct: 95 GQGGYGGGGDFGGGMGGGGYGGGGYGGGGD-GGGGYGGYGGGGYGGMGGGPGGYGMGGYG 153
Query: 742 GG 737
GG
Sbjct: 154 GG 155
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
isoform b protein.
Length = 2692
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +2
Query: 656 PLHVPPXPXPFXQFXIPAHXYHXPPPXPSXTNIXXPPA 769
P P P PF P Y PPP S + PA
Sbjct: 1975 PAQKSPQPAPFHSITEPLSDYPVPPPLGSLVGLPPMPA 2012
>AC006777-7|AAK72306.2| 367|Caenorhabditis elegans Seven tm
receptor protein 222 protein.
Length = 367
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 86 LNLTFSEISFFGVSAVFCVKN 148
+N++F I FFG+ FC++N
Sbjct: 215 VNISFLAIFFFGIKCYFCIQN 235
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,358,555
Number of Sequences: 27780
Number of extensions: 287046
Number of successful extensions: 1189
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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