Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_O03
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    35   0.076
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646...    26   1.6  
07_03_1136 + 24218601-24218734,24218769-24219906                       30   2.2  
01_01_0715 - 5542648-5543219,5543352-5543544                           29   5.0  
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533...    24   7.0  
02_04_0654 - 24755339-24755408,24755488-24755624,24756243-247563...    28   8.7  
01_01_0224 - 1905978-1907084,1907489-1908070,1908653-1908667           28   8.7  

>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 35.1 bits (77), Expect = 0.076
 Identities = 18/39 (46%), Positives = 18/39 (46%)
 Frame = +2

Query: 578  PRIPPLXEG*FGXPXPXXKXPXGXXXGPXPPPPPXXXXG 694
            P  PPL EG  G P P    P G   GP  PPPP    G
Sbjct: 1136 PPAPPLPEGIGGVPPP---PPVGGLGGPPAPPPPAGFRG 1171


>04_03_0660 +
           18463011-18463322,18463424-18463516,18464500-18464607,
           18464892-18465044,18465256-18465354,18465443-18465571,
           18465987-18466166,18466208-18466246,18466247-18466363,
           18466445-18466609
          Length = 464

 Score = 25.8 bits (54), Expect(2) = 1.6
 Identities = 10/31 (32%), Positives = 12/31 (38%)
 Frame = +1

Query: 586 PPFXGGLIWXPXPXXKKXLXXXXXAPPPPPP 678
           P +    IW   P   +        PPPPPP
Sbjct: 27  PDWLNSPIWSAPPPPARHRAPSPPRPPPPPP 57



 Score = 23.4 bits (48), Expect(2) = 1.6
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 658 APPPPPPXXXXG 693
           APPPPPP    G
Sbjct: 63  APPPPPPARSGG 74


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = -2

Query: 678 GGGGGXGPXXXPKGFFXXGXGXPN*PSXKGG 586
           GGGGG GP   P G    G   P  P   GG
Sbjct: 110 GGGGGGGPPSLPPGAGGGGGARPPAPGGGGG 140


>01_01_0715 - 5542648-5543219,5543352-5543544
          Length = 254

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
 Frame = +2

Query: 572 PRPRIPPLXEG*FGX---PXPXXKXPXGXXXGPXPPPPP 679
           PRP  PP   G  G    P P    P      P PPPPP
Sbjct: 157 PRPSPPPPAAGTNGTARAPSPPVPAPAPAGSPPPPPPPP 195


>07_03_1147 +
           24349811-24350161,24351031-24351366,24353260-24353376,
           24353585-24353647,24354066-24354139,24354216-24354306,
           24354791-24354850,24355270-24355462,24356242-24356522,
           24357435-24357536,24357664-24357774,24358410-24358475,
           24358562-24358660,24358757-24358788,24359171-24359274,
           24359380-24359507,24359625-24359756,24360051-24360359,
           24360887-24361071,24361161-24361263,24361407-24361552,
           24361748-24361827,24361901-24362103
          Length = 1121

 Score = 23.8 bits (49), Expect(2) = 7.0
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +2

Query: 617 PXPXXKXPXGXXXGPXPPPPP 679
           P P    P      P PPPPP
Sbjct: 50  PQPTLPPPPPRTLPPPPPPPP 70



 Score = 23.0 bits (47), Expect(2) = 7.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 659 PXPPPPPXXXXGXK 700
           P PPPPP    G K
Sbjct: 65  PPPPPPPQPPVGFK 78


>02_04_0654 -
           24755339-24755408,24755488-24755624,24756243-24756326,
           24756929-24756944,24758035-24758405
          Length = 225

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/41 (34%), Positives = 14/41 (34%)
 Frame = +2

Query: 572 PRPRIPPLXEG*FGXPXPXXKXPXGXXXGPXPPPPPXXXXG 694
           P P  PPL       P P           P PPPPP    G
Sbjct: 33  PPPPPPPLFPAMSARPQPPRPAHPARFVKPMPPPPPPFPKG 73


>01_01_0224 - 1905978-1907084,1907489-1908070,1908653-1908667
          Length = 567

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 377 ILKLTSRLNNTSIYGVRFKDHFPIALAEPRTSIAGPA 267
           +LKL  R   T+I  V+ ++ FPI     +T+I  PA
Sbjct: 206 VLKLGRRTGGTAIRVVQVENSFPIGACINKTAIQNPA 242


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,759,517
Number of Sequences: 37544
Number of extensions: 424846
Number of successful extensions: 5151
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4119
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)