Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_N19
(971 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 36 0.044
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 36 0.044
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 36 0.044
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.23
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.23
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.23
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.23
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.23
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.31
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 32 0.54
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.2
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.6
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.9
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.9
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.9
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.8
Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical pr... 25 3.9
AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical... 29 6.6
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 8.7
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 28 8.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 8.7
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 35.9 bits (79), Expect = 0.044
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 722 PPPGXXKXXPXRSPPWKXXPPXXXPLVPXPP 814
PPP P R PPW PP P P PP
Sbjct: 56 PPPWDRPPPPWRRPPWHRRPPWGLPPPPPPP 86
Score = 28.7 bits (61), Expect = 6.6
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 4/64 (6%)
Frame = +2
Query: 722 PPPGXXKXXPXRSPPWKXXPPXXXPLVPXP---PAXXTRNTLARLFPPF-RGNGXXXPPX 889
PPP P R PW PP P P P R PP+ R PP
Sbjct: 25 PPPDWFFPGPLR--PWGPPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPP 82
Query: 890 PPPP 901
PPPP
Sbjct: 83 PPPP 86
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 35.9 bits (79), Expect = 0.044
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = +2
Query: 722 PPPGXXKXXPXRSPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFRGNGXXXP--PXPP 895
PPPG P PP + PP P PP + PP G+ P PP
Sbjct: 694 PPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQPGHPYQQPYGQMPP 753
Query: 896 PPLG 907
PP G
Sbjct: 754 PPHG 757
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 35.9 bits (79), Expect = 0.044
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = +2
Query: 722 PPPGXXKXXPXRSPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFRGNGXXXP--PXPP 895
PPPG P PP + PP P PP + PP G+ P PP
Sbjct: 694 PPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQPGHPYQQPYGQMPP 753
Query: 896 PPLG 907
PP G
Sbjct: 754 PPHG 757
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/60 (28%), Positives = 21/60 (35%)
Frame = +2
Query: 722 PPPGXXKXXPXRSPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFRGNGXXXPPXPPPP 901
PPP + PP + P PP + PP +G PP PPPP
Sbjct: 245 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 304
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +2
Query: 695 TPQXXRXANPPPGXXKXXPXRSPPWKXXP-PXXXPLVPXPPAXXTRNTLARLFPPFRGNG 871
TP PPP P PP P P P +P PP +R PP G G
Sbjct: 280 TPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP------SRFGPP--GMG 331
Query: 872 XXXPPXPP 895
PP PP
Sbjct: 332 GMPPPPPP 339
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.23
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 3/65 (4%)
Frame = +2
Query: 722 PPPGXXKXX---PXRSPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFRGNGXXXPPXP 892
PPPG P PP P P P PP + PP G PP P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 893 PPPLG 907
PPP G
Sbjct: 775 PPPGG 779
Score = 31.5 bits (68), Expect = 0.94
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Frame = +2
Query: 722 PPPGXXKXXPXRSPPWKXXPPXXXPLV---PXPPAXXTRNTLARLFPPFRGNGXXXPPXP 892
PPPG PP PP P + P PP PP G PP P
Sbjct: 730 PPPGGLPPITGGPPP--PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Query: 893 PPP 901
PPP
Sbjct: 788 PPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.23
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 3/65 (4%)
Frame = +2
Query: 722 PPPGXXKXX---PXRSPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFRGNGXXXPPXP 892
PPPG P PP P P P PP + PP G PP P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 893 PPPLG 907
PPP G
Sbjct: 775 PPPGG 779
Score = 31.5 bits (68), Expect = 0.94
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Frame = +2
Query: 722 PPPGXXKXXPXRSPPWKXXPPXXXPLV---PXPPAXXTRNTLARLFPPFRGNGXXXPPXP 892
PPPG PP PP P + P PP PP G PP P
Sbjct: 730 PPPGGLPPITGGPPP--PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Query: 893 PPP 901
PPP
Sbjct: 788 PPP 790
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/60 (28%), Positives = 21/60 (35%)
Frame = +2
Query: 722 PPPGXXKXXPXRSPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFRGNGXXXPPXPPPP 901
PPP + PP + P PP + PP +G PP PPPP
Sbjct: 255 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 314
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +2
Query: 695 TPQXXRXANPPPGXXKXXPXRSPPWKXXP-PXXXPLVPXPPAXXTRNTLARLFPPFRGNG 871
TP PPP P PP P P P +P PP +R PP G G
Sbjct: 290 TPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP------SRFGPP--GMG 341
Query: 872 XXXPPXPP 895
PP PP
Sbjct: 342 GMPPPPPP 349
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.23
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 3/65 (4%)
Frame = +2
Query: 722 PPPGXXKXX---PXRSPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFRGNGXXXPPXP 892
PPPG P PP P P P PP + PP G PP P
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Query: 893 PPPLG 907
PPP G
Sbjct: 358 PPPGG 362
Score = 31.5 bits (68), Expect = 0.94
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Frame = +2
Query: 722 PPPGXXKXXPXRSPPWKXXPPXXXPLV---PXPPAXXTRNTLARLFPPFRGNGXXXPPXP 892
PPPG PP PP P + P PP PP G PP P
Sbjct: 313 PPPGGLPPITGGPPP--PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Query: 893 PPP 901
PPP
Sbjct: 371 PPP 373
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.1 bits (72), Expect = 0.31
Identities = 19/62 (30%), Positives = 24/62 (38%)
Frame = +2
Query: 716 ANPPPGXXKXXPXRSPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFRGNGXXXPPXPP 895
++PPP P R+PP + PP P+ P P T P P PP
Sbjct: 136 SSPPPPPPPRVP-RTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPP 194
Query: 896 PP 901
PP
Sbjct: 195 PP 196
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.3 bits (70), Expect = 0.54
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 7/77 (9%)
Frame = +2
Query: 698 PQXXRXANPPPGXXKXXPXRSPPWKXXPP-------XXXPLVPXPPAXXTRNTLARLFPP 856
P A PPPG P PP PP P P PP PP
Sbjct: 700 PMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPP 759
Query: 857 FRGNGXXXPPXPPPPLG 907
F PPPP G
Sbjct: 760 FGRGAGPMSSFPPPPRG 776
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/68 (29%), Positives = 23/68 (33%), Gaps = 9/68 (13%)
Frame = +2
Query: 716 ANPPPGXXKXXPXRSPPWKXXPPXXXPLV---------PXPPAXXTRNTLARLFPPFRGN 868
A PPPG P PP P P + P PP ++ PP RG
Sbjct: 718 APPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGG 777
Query: 869 GXXXPPXP 892
PP P
Sbjct: 778 MHHMPPPP 785
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 966 GAXXAXRWGGGGPXXRXGXXPXGGGGXGG 880
G+ WGG G R G GGGG GG
Sbjct: 150 GSNGGGDWGGNGGGGRGGGGGRGGGGGGG 178
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 966 GAXXAXRWGGGGPXXRXGXXPXGGGGXGG 880
G RWGGGG G GG G GG
Sbjct: 33 GGWGGNRWGGGGGPGGWGNNGGGGWGRGG 61
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/75 (32%), Positives = 25/75 (33%)
Frame = -3
Query: 945 WGGGGPXXRXGXXPXGGGGXGGXXXPFPXXXXXXXXXXXXXXXXXGXGTRGXXXGGXXFQ 766
WGGGGP G GG G GG G G RG GG +
Sbjct: 48 WGGGGPGWGRG---GGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGR 104
Query: 765 GGERXGXXLXXPGGG 721
GG G GGG
Sbjct: 105 GGGGGGRGGGGGGGG 119
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 3/72 (4%)
Frame = +2
Query: 695 TPQXXRXANPPPGXXKXXPXRSPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFRGNGX 874
+P R +PPP P PP PP P PP + PP + G
Sbjct: 263 SPPPPRTGSPPPPPTGSPP--PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS 320
Query: 875 XXPP---XPPPP 901
P PPPP
Sbjct: 321 PPPAGTGSPPPP 332
Score = 29.9 bits (64), Expect = 2.9
Identities = 28/75 (37%), Positives = 29/75 (38%), Gaps = 5/75 (6%)
Frame = +2
Query: 722 PPPGXXKXXPXR--SPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFRGNGXXXPPXPP 895
PPP P R SPP PP P P PPA + PP R G PP PP
Sbjct: 257 PPPAAGSPPPPRTGSPP---PPPTGSP--PPPPAGGSP-------PPPRA-GSPPPPPPP 303
Query: 896 ---PPLGXXPXRXXG 931
PP G P G
Sbjct: 304 RGSPPTGSLPPPQAG 318
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 3/72 (4%)
Frame = +2
Query: 695 TPQXXRXANPPPGXXKXXPXRSPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFRGNGX 874
+P R +PPP P PP PP P PP + PP + G
Sbjct: 284 SPPPPRTGSPPPPPTGSPP--PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS 341
Query: 875 XXPP---XPPPP 901
P PPPP
Sbjct: 342 PPPAGTGSPPPP 353
Score = 29.9 bits (64), Expect = 2.9
Identities = 28/75 (37%), Positives = 29/75 (38%), Gaps = 5/75 (6%)
Frame = +2
Query: 722 PPPGXXKXXPXR--SPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFRGNGXXXPPXPP 895
PPP P R SPP PP P P PPA + PP R G PP PP
Sbjct: 278 PPPAAGSPPPPRTGSPP---PPPTGSP--PPPPAGGSP-------PPPRA-GSPPPPPPP 324
Query: 896 ---PPLGXXPXRXXG 931
PP G P G
Sbjct: 325 RGSPPTGSLPPPQAG 339
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 3/72 (4%)
Frame = +2
Query: 695 TPQXXRXANPPPGXXKXXPXRSPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFRGNGX 874
+P R +PPP P PP PP P PP + PP + G
Sbjct: 269 SPPPPRTGSPPPPPTGSPP--PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS 326
Query: 875 XXPP---XPPPP 901
P PPPP
Sbjct: 327 PPPAGTGSPPPP 338
Score = 29.9 bits (64), Expect = 2.9
Identities = 28/75 (37%), Positives = 29/75 (38%), Gaps = 5/75 (6%)
Frame = +2
Query: 722 PPPGXXKXXPXR--SPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFRGNGXXXPPXPP 895
PPP P R SPP PP P P PPA + PP R G PP PP
Sbjct: 263 PPPAAGSPPPPRTGSPP---PPPTGSP--PPPPAGGSP-------PPPRA-GSPPPPPPP 309
Query: 896 ---PPLGXXPXRXXG 931
PP G P G
Sbjct: 310 RGSPPTGSLPPPQAG 324
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Frame = +2
Query: 725 PPGXXKXXPXRSPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFR---GNG-XXXPPXP 892
PP P R P PP P P P + +PP R G+G PP P
Sbjct: 143 PPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMP 202
Query: 893 PPP 901
PP
Sbjct: 203 GPP 205
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Frame = +2
Query: 725 PPGXXKXXPXRSPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFR---GNG-XXXPPXP 892
PP P R P PP P P P + +PP R G+G PP P
Sbjct: 143 PPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMP 202
Query: 893 PPP 901
PP
Sbjct: 203 GPP 205
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.9
Identities = 24/74 (32%), Positives = 24/74 (32%)
Frame = -3
Query: 942 GGGGPXXRXGXXPXGGGGXGGXXXPFPXXXXXXXXXXXXXXXXXGXGTRGXXXGGXXFQG 763
GGGG G GGGG GG P P G G G GG G
Sbjct: 87 GGGGGCGGGGGGCGGGGGCGGGCAP-PPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGG 145
Query: 762 GERXGXXLXXPGGG 721
G G GGG
Sbjct: 146 GGGCGGGGGGCGGG 159
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/71 (32%), Positives = 24/71 (33%)
Frame = +2
Query: 695 TPQXXRXANPPPGXXKXXPXRSPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFRGNGX 874
TP+ A PPP P PP P PP L P G G
Sbjct: 600 TPENRPHAVPPP------PPPPPPQSFGMAPISSAAPPPPPPPPPMGL-----PAVGAGA 648
Query: 875 XXPPXPPPPLG 907
PP PPPP G
Sbjct: 649 PPPPPPPPPSG 659
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/71 (32%), Positives = 24/71 (33%)
Frame = +2
Query: 695 TPQXXRXANPPPGXXKXXPXRSPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFRGNGX 874
TP+ A PPP P PP P PP L P G G
Sbjct: 426 TPENRPHAVPPP------PPPPPPQSFGMAPISSAAPPPPPPPPPMGL-----PAVGAGA 474
Query: 875 XXPPXPPPPLG 907
PP PPPP G
Sbjct: 475 PPPPPPPPPSG 485
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = +2
Query: 722 PPPGXXKXXPXRSPPWKXXP-PXXXPLVPXPPAXXTRNTLARLFPPFRGNGXXXPPXPPP 898
PPP R K P P P+ PP LA G PP PPP
Sbjct: 512 PPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAA-----NGTNVPIPPPPPP 566
Query: 899 PL 904
PL
Sbjct: 567 PL 568
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/79 (29%), Positives = 26/79 (32%), Gaps = 5/79 (6%)
Frame = +2
Query: 695 TPQXXRXANPPPGXXKXXPXRSPPWK-----XXPPXXXPLVPXPPAXXTRNTLARLFPPF 859
T + ANPPP + P PP + PP P P PP N P
Sbjct: 131 TKTLPKPANPPPNAPQQGPGAQPPQQQNNGGYVPPTVYPSAP-PPVQPGYNP-----RPA 184
Query: 860 RGNGXXXPPXPPPPLGXXP 916
G P PP G P
Sbjct: 185 SGQSYPSGPQVPPAYGQYP 203
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = +2
Query: 749 PXRSPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFRGNGXXXPPXPPPPL 904
P PP PP L P PP T+++ G P PPPPL
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSK-----APTGVPLPVPPPPPL 1382
>Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical
protein C08B6.10 protein.
Length = 140
Score = 25.0 bits (52), Expect(2) = 3.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 755 RSPPWKXXPPXXXPLVPXPP 814
R P W+ PP P P PP
Sbjct: 113 RGPWWRRPPPPWGPPPPGPP 132
Score = 23.0 bits (47), Expect(2) = 3.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 881 PPXPPPPLG 907
PP PPPP G
Sbjct: 128 PPGPPPPFG 136
>AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical
protein Y53F4B.25 protein.
Length = 603
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 719 NPPPGXXKXXPXRSPPWKXXPPXXXPLVPXPP 814
NP P P +PP PP P+VP P
Sbjct: 445 NPTPPPRLPQPPTAPPTVPPPPNQAPIVPHQP 476
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.3 bits (60), Expect = 8.7
Identities = 23/79 (29%), Positives = 29/79 (36%), Gaps = 5/79 (6%)
Frame = +2
Query: 686 QNXTPQXXRXANPP-PGXXKXXPXRSPPWKXXPPXXXPLVPX----PPAXXTRNTLARLF 850
Q P R A+ P P + PP PP P + PP+ +
Sbjct: 741 QQQHPSLPRSASTPQPIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPL 800
Query: 851 PPFRGNGXXXPPXPPPPLG 907
PP +G PP PPPP G
Sbjct: 801 PPI-SSGAPPPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.3 bits (60), Expect = 8.7
Identities = 23/79 (29%), Positives = 29/79 (36%), Gaps = 5/79 (6%)
Frame = +2
Query: 686 QNXTPQXXRXANPP-PGXXKXXPXRSPPWKXXPPXXXPLVPX----PPAXXTRNTLARLF 850
Q P R A+ P P + PP PP P + PP+ +
Sbjct: 741 QQQHPSLPRSASTPQPIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPL 800
Query: 851 PPFRGNGXXXPPXPPPPLG 907
PP +G PP PPPP G
Sbjct: 801 PPI-SSGAPPPPPPPPPGG 818
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 687 KTXPPXSXGXPTPRPGLXKXXXXVPPPGNXXP 782
K P G PTP PG + P PG+ P
Sbjct: 413 KQEVPSGSGQPTPVPGTPQPQQITPQPGSLGP 444
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 8.7
Identities = 21/78 (26%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Frame = +2
Query: 686 QNXTPQXXRXANPP-PGXXKXXPXRSPPWKXXPPXXXPLVPXPPAXXTRNTLARLFPPFR 862
Q+ PQ PP P + P +PP P P P A +N + PP
Sbjct: 41 QSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPA 100
Query: 863 GNGXXXPPXPPPPLGXXP 916
P P PP P
Sbjct: 101 PYPQHAVPAPAPPPAPYP 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,855,352
Number of Sequences: 27780
Number of extensions: 182318
Number of successful extensions: 1451
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2521399358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -