Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_N17
(940 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.22
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.22
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.22
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 32 0.68
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.3
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 6.3
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 6.3
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 29 6.3
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 6.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.3
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 8.4
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/85 (25%), Positives = 25/85 (29%)
Frame = +2
Query: 626 PXPXXPXRGGXXPPTXXXXLXXXXPPPPKXPXKKXXXXGKXXDPXALXXXPPXXXPKTXX 805
P P P G P PPPP P G+ P + PP P
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP-------GRTPGPPGMPGMPPPPPPSRFG 326
Query: 806 PPXXXXXXXFXPPLRXXXXXLXPPP 880
PP PP + PPP
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPP 351
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +1
Query: 754 PXXPXXAXPXXPAXNXXXPXPXXXPXFFXPPPGXXXXXXPPPXXXPXXXPXXXXXXXXPP 933
P P P P P P PPP PPP P P PP
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPR--PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP 318
Query: 934 XP 939
P
Sbjct: 319 PP 320
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +3
Query: 807 PPTXXXSXFFXPPSGXXXGXSPPPXXXPXXXPPXXXXXXXPP 932
PP S + PP G +P P P PP PP
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 328
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/85 (25%), Positives = 25/85 (29%)
Frame = +2
Query: 626 PXPXXPXRGGXXPPTXXXXLXXXXPPPPKXPXKKXXXXGKXXDPXALXXXPPXXXPKTXX 805
P P P G P PPPP P G+ P + PP P
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP-------GRTPGPPGMPGMPPPPPPSRFG 336
Query: 806 PPXXXXXXXFXPPLRXXXXXLXPPP 880
PP PP + PPP
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPP 361
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +1
Query: 754 PXXPXXAXPXXPAXNXXXPXPXXXPXFFXPPPGXXXXXXPPPXXXPXXXPXXXXXXXXPP 933
P P P P P P PPP PPP P P PP
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPR--PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP 328
Query: 934 XP 939
P
Sbjct: 329 PP 330
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +3
Query: 807 PPTXXXSXFFXPPSGXXXGXSPPPXXXPXXXPPXXXXXXXPP 932
PP S + PP G +P P P PP PP
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 338
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.22
Identities = 25/86 (29%), Positives = 26/86 (30%), Gaps = 1/86 (1%)
Frame = +1
Query: 625 PGPXXPLXGGXXAPXXXKXLGGXGPXPP*XXRQKXXXXXXXXGPXXPXXAXPXXPAXNXX 804
PG P AP GG GP PP GP P P
Sbjct: 387 PGAFAPPPSAFGAPQGPGGPGGYGPPPP-------------GGPGAPGSYGPPQGGPGGF 433
Query: 805 XPXPXXXPXFFXPPP-GXXXXXXPPP 879
P P P + PPP G PPP
Sbjct: 434 GPPPPGGPGAYGPPPTGFPPVGAPPP 459
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.9 bits (69), Expect = 0.68
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 754 PXXPXXAXPXXPAXNXXXPXPXXXPXFFXPPPGXXXXXXPPPXXXPXXXP 903
P P A P P P P F PPP PPP P P
Sbjct: 37 PRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPP 86
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 808 PXPXXXPXFFXPPPGXXXXXXPPPXXXPXXXPXXXXXXXXPPXP 939
P P P PPP PPP P P PP P
Sbjct: 46 PMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMP 89
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/100 (25%), Positives = 26/100 (26%), Gaps = 2/100 (2%)
Frame = +2
Query: 641 PXRGGXXPPTXXXXLXXXXPPPPKXPXKKXXXXGKXXDPXALXXXPP--XXXPKTXXPPX 814
P GG PP + PPPP P G P PP P PP
Sbjct: 708 PITGGPPPPPGLPPI-TGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 815 XXXXXXFXPPLRXXXXXLXPPPXXXXXXPPXXXXXXXXPP 934
PP PPP P PP
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/100 (25%), Positives = 26/100 (26%), Gaps = 2/100 (2%)
Frame = +2
Query: 641 PXRGGXXPPTXXXXLXXXXPPPPKXPXKKXXXXGKXXDPXALXXXPP--XXXPKTXXPPX 814
P GG PP + PPPP P G P PP P PP
Sbjct: 708 PITGGPPPPPGLPPI-TGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 815 XXXXXXFXPPLRXXXXXLXPPPXXXXXXPPXXXXXXXXPP 934
PP PPP P PP
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/100 (25%), Positives = 26/100 (26%), Gaps = 2/100 (2%)
Frame = +2
Query: 641 PXRGGXXPPTXXXXLXXXXPPPPKXPXKKXXXXGKXXDPXALXXXPP--XXXPKTXXPPX 814
P GG PP + PPPP P G P PP P PP
Sbjct: 291 PITGGPPPPPGLPPI-TGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 815 XXXXXXFXPPLRXXXXXLXPPPXXXXXXPPXXXXXXXXPP 934
PP PPP P PP
Sbjct: 350 GCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 389
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/104 (24%), Positives = 27/104 (25%)
Frame = +2
Query: 623 SPXPXXPXRGGXXPPTXXXXLXXXXPPPPKXPXKKXXXXGKXXDPXALXXXPPXXXPKTX 802
SP P P +G PP PPPP P PP +
Sbjct: 236 SPPPPPPPKGS--PPLAGSG----SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 289
Query: 803 XPPXXXXXXXFXPPLRXXXXXLXPPPXXXXXXPPXXXXXXXXPP 934
PP PP PPP PP PP
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/104 (24%), Positives = 27/104 (25%)
Frame = +2
Query: 623 SPXPXXPXRGGXXPPTXXXXLXXXXPPPPKXPXKKXXXXGKXXDPXALXXXPPXXXPKTX 802
SP P P +G PP PPPP P PP +
Sbjct: 257 SPPPPPPPKGS--PPLAGSG----SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 310
Query: 803 XPPXXXXXXXFXPPLRXXXXXLXPPPXXXXXXPPXXXXXXXXPP 934
PP PP PPP PP PP
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/104 (24%), Positives = 27/104 (25%)
Frame = +2
Query: 623 SPXPXXPXRGGXXPPTXXXXLXXXXPPPPKXPXKKXXXXGKXXDPXALXXXPPXXXPKTX 802
SP P P +G PP PPPP P PP +
Sbjct: 242 SPPPPPPPKGS--PPLAGSG----SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 295
Query: 803 XPPXXXXXXXFXPPLRXXXXXLXPPPXXXXXXPPXXXXXXXXPP 934
PP PP PPP PP PP
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/62 (29%), Positives = 20/62 (32%)
Frame = -3
Query: 938 GXGGXXXXXXXXGXXXGXXXGGGXXXXXXPGGGXKKXGXXXGXGXXLFXAGXKGXAXXGX 759
G GG G G GGG GGG G G G + +G G G
Sbjct: 158 GGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGS 217
Query: 758 XG 753
G
Sbjct: 218 SG 219
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/81 (27%), Positives = 23/81 (28%)
Frame = -2
Query: 939 GXGGXXXXXXXXGGXXXXXXGGGXXXXXXXRRGGKKXXXXXWXGGXXVXGXXXGGCXXRA 760
G GG GG GGG GG GG G GGC +
Sbjct: 116 GCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGS 175
Query: 759 XGSXXXPXXXXFLXGXLGGGG 697
G G GGGG
Sbjct: 176 SGGGGYAVAPSG-GGGCGGGG 195
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/62 (29%), Positives = 20/62 (32%)
Frame = -3
Query: 938 GXGGXXXXXXXXGXXXGXXXGGGXXXXXXPGGGXKKXGXXXGXGXXLFXAGXKGXAXXGX 759
G GG G G GGG GGG G G G + +G G G
Sbjct: 158 GGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGS 217
Query: 758 XG 753
G
Sbjct: 218 SG 219
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/81 (27%), Positives = 23/81 (28%)
Frame = -2
Query: 939 GXGGXXXXXXXXGGXXXXXXGGGXXXXXXXRRGGKKXXXXXWXGGXXVXGXXXGGCXXRA 760
G GG GG GGG GG GG G GGC +
Sbjct: 116 GCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGS 175
Query: 759 XGSXXXPXXXXFLXGXLGGGG 697
G G GGGG
Sbjct: 176 SGGGGYAVAPSG-GGGCGGGG 195
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 826 PXFFXPPPGXXXXXXPPPXXXPXXXPXXXXXXXXPPXP 939
P FF PPP PPP P PP P
Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPP 98
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = -3
Query: 938 GXGGXXXXXXXXGXXXGXXXGGGXXXXXXPGGGXKKXGXXXGXGXXLFXAGXKGXAXXG 762
G GG G G GGG GGG + G G G G +G G
Sbjct: 76 GGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRG 134
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/63 (28%), Positives = 18/63 (28%), Gaps = 4/63 (6%)
Frame = +1
Query: 763 PXXAXPXXP----AXNXXXPXPXXXPXFFXPPPGXXXXXXPPPXXXPXXXPXXXXXXXXP 930
P A P P A P P P P P PPP P P P
Sbjct: 93 PVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPP 152
Query: 931 PXP 939
P P
Sbjct: 153 PAP 155
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 808 PXPXXXPXFFXPPPGXXXXXXPPP 879
P P P F PPPG PPP
Sbjct: 248 PLPATAPNFSLPPPGYNPLNPPPP 271
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/83 (25%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Frame = +2
Query: 698 PPPPKXPXKKXXXXGKXXDPXA-LXXXPPXXXPKTXXPPXXXXXXXFX-PPLRXXXXXLX 871
P PP P + + A L PP P + PP PP
Sbjct: 28 PAPPALPRELTQISTETAAAVAALVRKPPPSLPPSTMPPGPHGMPFMGGPPPHHQYHLQY 87
Query: 872 PPPXXXXXXPPXXXXXXXXPPXP 940
PPP PP PP P
Sbjct: 88 PPPHGLGPPPPPPHYYTQPPPPP 110
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = +2
Query: 623 SPXPXXPXRGGXXPPTXXXXLXXXXPPPPKXPXKKXXXXGKXXDPXALXXXPPXXXPKTX 802
SP P P PP L PPPP P G P + PP P
Sbjct: 1335 SPSPPPPP---PPPPPPSDDLTPVPPPPPPPPTMSKAPTGV---PLPVPPPPPLFSPSMI 1388
Query: 803 XPP 811
PP
Sbjct: 1389 LPP 1391
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = -3
Query: 938 GXGGXXXXXXXXGXXXGXXXGGGXXXXXXPGGGXKKXGXXXGXGXXLFXAGXKGXAXXGX 759
G GG G G GGG GGG G G G G G G
Sbjct: 187 GFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPGGGYGMGGGGG 246
Query: 758 XG 753
G
Sbjct: 247 GG 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,452,778
Number of Sequences: 27780
Number of extensions: 334619
Number of successful extensions: 1274
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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