Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_N10
         (930 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46934-11|CAE18043.1|  497|Caenorhabditis elegans Hypothetical p...    30   2.1  
Z46934-10|CAD18882.1|  495|Caenorhabditis elegans Hypothetical p...    30   2.1  
Z81507-1|CAB04133.1|  485|Caenorhabditis elegans Hypothetical pr...    30   2.7  
AF036698-2|AAB88353.1|  485|Caenorhabditis elegans Puf (pumilio/...    30   2.7  
U39855-3|AAA81082.1|  467|Caenorhabditis elegans Patterned expre...    29   4.7  
U13019-4|AAC24451.1|  222|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr...    29   6.3  
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr...    28   8.3  
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ...    28   8.3  

>Z46934-11|CAE18043.1|  497|Caenorhabditis elegans Hypothetical
           protein ZK1320.12b protein.
          Length = 497

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 203 DYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCM 313
           D D + EK +    +KK   IT++VN +IRN    C+
Sbjct: 205 DIDFSYEKVREAMSQKKRNGITSLVNYMIRNYPSICL 241


>Z46934-10|CAD18882.1|  495|Caenorhabditis elegans Hypothetical
           protein ZK1320.12a protein.
          Length = 495

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 203 DYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCM 313
           D D + EK +    +KK   IT++VN +IRN    C+
Sbjct: 205 DIDFSYEKVREAMSQKKRNGITSLVNYMIRNYPSICL 241


>Z81507-1|CAB04133.1|  485|Caenorhabditis elegans Hypothetical
           protein F18A11.1 protein.
          Length = 485

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +2

Query: 260 VITNVVNKLIRNNKMNCMEYAYQLWLQGSKDIVRDCFPVEFRLIFAENAIKLMYKRDGL 436
           ++  V+++L  N K+ C ++  QL       IVR+C+ +     FA   I+ + K  G+
Sbjct: 257 LVQQVIDRLAENPKLPCFKFRIQLLHSLMTCIVRNCYRLSSN-EFANYVIQYVIKSSGI 314


>AF036698-2|AAB88353.1|  485|Caenorhabditis elegans Puf
           (pumilio/fbf) domain-containingprotein 7 protein.
          Length = 485

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +2

Query: 260 VITNVVNKLIRNNKMNCMEYAYQLWLQGSKDIVRDCFPVEFRLIFAENAIKLMYKRDGL 436
           ++  V+++L  N K+ C ++  QL       IVR+C+ +     FA   I+ + K  G+
Sbjct: 257 LVQQVIDRLAENPKLPCFKFRIQLLHSLMTCIVRNCYRLSSN-EFANYVIQYVIKSSGI 314


>U39855-3|AAA81082.1|  467|Caenorhabditis elegans Patterned
           expression site protein 8 protein.
          Length = 467

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 836 FGTSGLLXXLYPP-GHAVTRGVQPVPXP 756
           FG S  +  +YPP G+A+  G  P+P P
Sbjct: 131 FGKSTTVALMYPPAGYAMPMGAYPIPIP 158


>U13019-4|AAC24451.1|  222|Caenorhabditis elegans Hypothetical
           protein T12A2.15b protein.
          Length = 222

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 491 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 589
           D KD+ +P VS KL+AL  N +V+ K   T +N
Sbjct: 120 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 152


>U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical
           protein T12A2.15a protein.
          Length = 713

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 491 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 589
           D KD+ +P VS KL+AL  N +V+ K   T +N
Sbjct: 611 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 643


>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
           protein T07D4.4a protein.
          Length = 1022

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +3

Query: 330 FGSRAPRTSSGIVSQLSSDL--SSPKTRLSLCTSATVS 437
           FG  APRT SG + Q S++L  S+PKT       A++S
Sbjct: 145 FGVLAPRTLSGSIPQTSTNLEDSTPKTSTGGRFGASIS 182


>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 106 NYSGLHLWSVESCVLPKNXT 47
           NY+ LH W +ES + P N T
Sbjct: 60  NYNNLHYWLIESQLTPSNDT 79


>Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical
           protein C44H9.4 protein.
          Length = 1099

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +2

Query: 482 AYGDGKDKTSPRVSWKLIALWENNK---VYFKILNTERNQYLVLGVGTNWNGDH 634
           ++G   +   PR  ++ I+ +   +    YF++L+ E N+Y+++    N +G H
Sbjct: 129 SWGPNFNSPKPRQVFRDISTYSYERGIRAYFRVLSAEDNKYILIACHANLHGLH 182


>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 106 NYSGLHLWSVESCVLPKNXT 47
           NY+ LH W +ES + P N T
Sbjct: 60  NYNNLHYWLIESQLTPSNDT 79


>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 106 NYSGLHLWSVESCVLPKNXT 47
           NY+ LH W +ES + P N T
Sbjct: 60  NYNNLHYWLIESQLTPSNDT 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,220,395
Number of Sequences: 27780
Number of extensions: 352600
Number of successful extensions: 1121
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)