Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_N08
(938 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical ... 91 8e-19
Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical pr... 91 1e-18
Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical pr... 91 1e-18
Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical pr... 71 2e-12
Z78415-10|CAB01676.2| 341|Caenorhabditis elegans Hypothetical p... 66 3e-11
AF016425-2|AAB65342.1| 337|Caenorhabditis elegans Hypothetical ... 64 1e-10
U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical pr... 62 7e-10
U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical pr... 62 7e-10
U64840-4|AAB04962.1| 316|Caenorhabditis elegans Serpentine rece... 29 4.8
AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine re... 29 4.8
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 29 4.8
>AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical
protein F54A3.4 protein.
Length = 755
Score = 91.5 bits (217), Expect = 8e-19
Identities = 46/90 (51%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Frame = +3
Query: 417 VHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAERR-- 590
V +L+ IG TPLVKL +PK G++C +Y KCEFLN GGS KDRIA +M AE+
Sbjct: 336 VLDSVLDAIGKTPLVKLQHVPKAHGVRCNVYVKCEFLNAGGSTKDRIAKKMVEIAEKTGK 395
Query: 591 --VFEAWQSVIVEPTSGNTGIGLALRXXVR 674
+ ++EPTSGNTGIGL+L VR
Sbjct: 396 PGALTPGATTLIEPTSGNTGIGLSLVAAVR 425
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3
Query: 450 TPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMF 572
T LV L KL + LK ++Y K E+LN GS++DR A+R F
Sbjct: 21 TQLVPLKKLKAEFQLKSDIYVKLEYLNISGSLEDRAAHRAF 61
>Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 90.6 bits (215), Expect = 1e-18
Identities = 46/85 (54%), Positives = 59/85 (69%), Gaps = 3/85 (3%)
Frame = +3
Query: 429 ILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAER--RVFEA 602
+L+ IG TPLVKL +PK G+KC +Y KCE++N GGS KDRIA RM AE+ + +
Sbjct: 382 VLDAIGKTPLVKLQHIPKAHGVKCNVYVKCEYMNAGGSTKDRIAKRMVEIAEKTGKPGKL 441
Query: 603 WQSV-IVEPTSGNTGIGLALRXXVR 674
V ++EPTSGNTGIGL+L VR
Sbjct: 442 VPGVTLIEPTSGNTGIGLSLASAVR 466
Score = 42.7 bits (96), Expect = 4e-04
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3
Query: 450 TPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAE 584
TPLV L KL + L+ ++Y K E+LN GS++DR A + F AE
Sbjct: 30 TPLVPLKKLKVEHQLQSDIYVKLEYLNIAGSLEDRTADKAFQFAE 74
>Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 90.6 bits (215), Expect = 1e-18
Identities = 46/85 (54%), Positives = 59/85 (69%), Gaps = 3/85 (3%)
Frame = +3
Query: 429 ILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAER--RVFEA 602
+L+ IG TPLVKL +PK G+KC +Y KCE++N GGS KDRIA RM AE+ + +
Sbjct: 382 VLDAIGKTPLVKLQHIPKAHGVKCNVYVKCEYMNAGGSTKDRIAKRMVEIAEKTGKPGKL 441
Query: 603 WQSV-IVEPTSGNTGIGLALRXXVR 674
V ++EPTSGNTGIGL+L VR
Sbjct: 442 VPGVTLIEPTSGNTGIGLSLASAVR 466
Score = 42.7 bits (96), Expect = 4e-04
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3
Query: 450 TPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAE 584
TPLV L KL + L+ ++Y K E+LN GS++DR A + F AE
Sbjct: 30 TPLVPLKKLKVEHQLQSDIYVKLEYLNIAGSLEDRTADKAFQFAE 74
>Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical
protein K10H10.2 protein.
Length = 337
Score = 70.5 bits (165), Expect = 2e-12
Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = +3
Query: 438 VIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAERR-VFEAWQSV 614
+IGNTPL+KL+K+ KD G + K E++NP SVKDRIA+ M AE+ + ++V
Sbjct: 13 LIGNTPLLKLNKIGKDLG--ASIAVKVEYMNPACSVKDRIAFNMIDTAEKAGLITPGKTV 70
Query: 615 IVEPTSGNTGIGLA 656
++EPTSGN GI LA
Sbjct: 71 LIEPTSGNMGIALA 84
>Z78415-10|CAB01676.2| 341|Caenorhabditis elegans Hypothetical
protein C17G1.7 protein.
Length = 341
Score = 66.5 bits (155), Expect = 3e-11
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +3
Query: 402 DRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDA 581
DRN + + +IGNTP+V ++KL K GL + K E++NP GSVKDRI M A
Sbjct: 3 DRNS-IGENAAALIGNTPMVYINKLTK--GLPGTVAVKIEYMNPAGSVKDRIGAAMLAAA 59
Query: 582 ER-RVFEAWQSVIVEPTSGNTGIGLA 656
E+ + ++EPTSGNTGI LA
Sbjct: 60 EKDGTVIPGVTTLIEPTSGNTGIALA 85
>AF016425-2|AAB65342.1| 337|Caenorhabditis elegans Hypothetical
protein F59A7.9 protein.
Length = 337
Score = 64.1 bits (149), Expect = 1e-10
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +3
Query: 399 LDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLD 578
+ R VH D + +GNTPLV L + K GL + K E+LNP SVKDRIA M D
Sbjct: 1 MSRELMVH-DSGDTVGNTPLVLLRNITK--GLDARIAVKIEYLNPSCSVKDRIAKTMVDD 57
Query: 579 AERR-VFEAWQSVIVEPTSGNTGIGLA 656
AE+ ++V+VE TSGN GI LA
Sbjct: 58 AEKAGKIVPGKTVLVEGTSGNLGIALA 84
>U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical
protein R08E5.2c protein.
Length = 304
Score = 61.7 bits (143), Expect = 7e-10
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +3
Query: 435 NVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAERR-VFEAWQS 611
+ IGNTPLV L + K GL + K E+LNP SVKDRIA M +AE+ ++
Sbjct: 12 DTIGNTPLVLLRNISK--GLDARIAVKVEYLNPSCSVKDRIAKSMVDEAEKAGTIVPGKT 69
Query: 612 VIVEPTSGNTGIGLA 656
V+VE TSGN GI LA
Sbjct: 70 VLVEGTSGNLGIALA 84
>U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical
protein R08E5.2a protein.
Length = 337
Score = 61.7 bits (143), Expect = 7e-10
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +3
Query: 435 NVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAERR-VFEAWQS 611
+ IGNTPLV L + K GL + K E+LNP SVKDRIA M +AE+ ++
Sbjct: 12 DTIGNTPLVLLRNISK--GLDARIAVKVEYLNPSCSVKDRIAKSMVDEAEKAGTIVPGKT 69
Query: 612 VIVEPTSGNTGIGLA 656
V+VE TSGN GI LA
Sbjct: 70 VLVEGTSGNLGIALA 84
>U64840-4|AAB04962.1| 316|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 68 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 303 CLSFLLLVFKIHNSLLYQFTQLAFQFNFFILFN 205
C FLL + K++ + Y+ QLA N F+ N
Sbjct: 38 CFQFLLGISKVYANSFYRLVQLALLTNTFVYLN 70
>AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 66 protein.
Length = 330
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 303 CLSFLLLVFKIHNSLLYQFTQLAFQFNFFILFN 205
C FLL + K++ + Y+ QLA N F+ N
Sbjct: 38 CFQFLLGISKVYANSFYRLVQLALLTNTFVYLN 70
>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
assigned gene nameprotein 80 protein.
Length = 4900
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 535 PGLRNSHFAYISHFNPSSLGNLDSFTS 455
P LR + Y SHF+PS + +L S TS
Sbjct: 4617 PPLRRTSITYTSHFSPSVIRDLRSSTS 4643
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,983,318
Number of Sequences: 27780
Number of extensions: 334309
Number of successful extensions: 726
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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