Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_N07
(1150 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0738 - 10824121-10825572 35 0.14
08_01_0576 - 5114636-5115151,5115254-5116183,5116898-5117614,511... 33 0.42
11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980... 31 1.3
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 25 2.0
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 30 3.0
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 30 3.0
05_01_0137 + 917533-917814,918080-918352 25 3.0
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 4.0
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 30 4.0
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 6.9
09_04_0616 + 18977421-18977907,18977984-18978245,18978903-18979149 29 9.1
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 9.1
02_02_0029 + 6204557-6204734,6205105-6205207,6205970-6206108 29 9.1
>03_02_0738 - 10824121-10825572
Length = 483
Score = 34.7 bits (76), Expect = 0.14
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXP 895
P P PPPL F P PP PP P
Sbjct: 81 PSPPSSSPPPLSFPPPPPPPSSPPPP 106
>08_01_0576 -
5114636-5115151,5115254-5116183,5116898-5117614,
5119630-5119746,5119930-5120295,5121365-5121634
Length = 971
Score = 33.1 bits (72), Expect = 0.42
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 806 GFXXPQXPXGXPPPLXFXPXPPYXGGPP 889
GF P P G PPP P GGPP
Sbjct: 749 GFPLPSLPSGPPPPSQIGPSSSQVGGPP 776
>11_04_0415 -
17395988-17396161,17397349-17397444,17397489-17398026,
17398106-17398422
Length = 374
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 894 GXGGPPX*GGXGXNXRGGGXPXGFWG 817
G GGP GG G GGG P GF G
Sbjct: 12 GGGGPRGFGGGGPRGFGGGGPRGFGG 37
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 894 GXGGPPX*GGXGXNXRGGGXPXGFWG 817
G GGP GG G GGG P GF G
Sbjct: 20 GGGGPRGFGGGGPRGFGGGGPRGFGG 45
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 894 GXGGPPX*GGXGXNXRGGGXPXGFWG 817
G GGP GG G GGG P GF G
Sbjct: 28 GGGGPRGFGGGGPRGFGGGGPRGFGG 53
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 894 GXGGPPX*GGXGXNXRGGGXPXGFWG 817
G G P GG G GGG P GF G
Sbjct: 4 GGGNPRGGGGGGPRGFGGGGPRGFGG 29
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 25.0 bits (52), Expect(2) = 5.6
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +1
Query: 199 PPPXXKKKXXXXXFFXXPPPPXXXXXXFXXXXXXXKXXXXXXXPPPPPP 345
PPP F PPPP PPPPPP
Sbjct: 548 PPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPP---PPPPPP 593
Score = 24.6 bits (51), Expect(2) = 2.0
Identities = 11/35 (31%), Positives = 11/35 (31%)
Frame = +1
Query: 241 FXXPPPPXXXXXXFXXXXXXXKXXXXXXXPPPPPP 345
F PPPP PPPPPP
Sbjct: 662 FPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPP 696
Score = 24.6 bits (51), Expect(2) = 2.0
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 328 PPPPPPXXXXXGGGFXPXP 384
PPPPPP G P P
Sbjct: 714 PPPPPPPANRSNGPSAPAP 732
Score = 22.6 bits (46), Expect(2) = 5.6
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = +1
Query: 328 PPPPPPXXXXXGGGFXPXP 384
PPPPPP P P
Sbjct: 603 PPPPPPPPILPNRSVPPPP 621
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXPKXXP 907
P P G PPP P P GGPP P P
Sbjct: 617 PPRPPGAPPP---PPPPGKPGGPPPPPPRP 643
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXPKXXP 907
P P G PPP P P GGPP P P
Sbjct: 922 PPRPPGAPPP---PPPPGKPGGPPPPPPPP 948
>05_01_0137 + 917533-917814,918080-918352
Length = 184
Score = 25.4 bits (53), Expect(2) = 3.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 330 PPPPPXXXXXGGGVFXXA 383
PPPPP GGGV A
Sbjct: 86 PPPPPPPAAGGGGVVLPA 103
Score = 23.4 bits (48), Expect(2) = 3.0
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +3
Query: 198 PPPPXXKKXXXXXXFXXPPPP 260
PPPP ++ PPPP
Sbjct: 70 PPPPSFRRRSFCRRCTPPPPP 90
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +2
Query: 797 PXXGFXXPQXPXGXPPPLXFXPXPPYXGGPPXPKXXPF 910
P G P P G PPP P PP GPP P F
Sbjct: 36 PAYGHMPP--PQGAPPPFLAPPPPP-PPGPPPPHQPQF 70
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = -3
Query: 383 GXGKNPPPXXXXXGGGGGGXXXXXXFFXXXXXXKXXXXXXXGGGG 249
G G PP GGGGGG ++ + GGGG
Sbjct: 63 GGGGGPPYYGGGGGGGGGGGGQGRGYYDDGGDGRGYQRGMEGGGG 107
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +2
Query: 818 PQXPXGXPP-PLXFXPXPPYXGGPP 889
P P G PP PL P PP GPP
Sbjct: 1123 PPLPDGPPPLPLDAPPPPPLPEGPP 1147
>09_04_0616 + 18977421-18977907,18977984-18978245,18978903-18979149
Length = 331
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 395 QXXPGXGKNPPPXXXXXGGGGGG 327
Q G G N PP GGGGGG
Sbjct: 262 QIIDGDGGNAPPAYRGGGGGGGG 284
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.7 bits (61), Expect = 9.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 386 PGXGKNPPPXXXXXGGGGGG 327
PG G PPP G GGGG
Sbjct: 364 PGPGPGPPPPPGAAGRGGGG 383
>02_02_0029 + 6204557-6204734,6205105-6205207,6205970-6206108
Length = 139
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -2
Query: 921 FPPKXGXXXGXGGPPX*GGXG-XNXRGGGXPXG 826
FPP+ GG P GG G + GGG P G
Sbjct: 43 FPPQWAPPVAGGGGPFAGGGGYGSGAGGGGPGG 75
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,363,201
Number of Sequences: 37544
Number of extensions: 524618
Number of successful extensions: 4415
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3796
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3491481604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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