Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_N07
(1150 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X98568-1|CAA67178.1| 680|Homo sapiens type X collagen protein. 33 2.6
X72579-1|CAA51170.1| 680|Homo sapiens collagen X protein. 33 2.6
X65120-1|CAA46236.1| 629|Homo sapiens alpha1(X)collagen protein. 33 2.6
X60382-1|CAA42933.1| 680|Homo sapiens collagen subunit (alpha-... 33 2.6
BC146776-1|AAI46777.1| 1542|Homo sapiens SET binding protein 1 p... 33 2.6
BC130623-1|AAI30624.1| 680|Homo sapiens collagen, type X, alpha... 33 2.6
BC130621-1|AAI30622.1| 680|Homo sapiens collagen, type X, alpha... 33 2.6
AL121963-4|CAB87590.1| 680|Homo sapiens collagen type X alpha 1... 33 2.6
AB022660-1|BAA82444.1| 1542|Homo sapiens SET-binding protein (SE... 33 2.6
AB007897-1|BAA24826.2| 1605|Homo sapiens KIAA0437 protein. 33 2.6
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 32 4.5
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 31 7.8
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 31 7.8
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 31 7.8
>X98568-1|CAA67178.1| 680|Homo sapiens type X collagen protein.
Length = 680
Score = 32.7 bits (71), Expect = 2.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 674 PGRPRXGGPKAHPQKPGXEREPGXG 600
PG+P GPK +P PG + +PG G
Sbjct: 391 PGKPGLDGPKGNPGLPGPKGDPGVG 415
>X72579-1|CAA51170.1| 680|Homo sapiens collagen X protein.
Length = 680
Score = 32.7 bits (71), Expect = 2.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 674 PGRPRXGGPKAHPQKPGXEREPGXG 600
PG+P GPK +P PG + +PG G
Sbjct: 391 PGKPGLDGPKGNPGLPGPKGDPGVG 415
>X65120-1|CAA46236.1| 629|Homo sapiens alpha1(X)collagen protein.
Length = 629
Score = 32.7 bits (71), Expect = 2.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 674 PGRPRXGGPKAHPQKPGXEREPGXG 600
PG+P GPK +P PG + +PG G
Sbjct: 340 PGKPGLDGPKGNPGLPGPKGDPGVG 364
>X60382-1|CAA42933.1| 680|Homo sapiens collagen subunit (alpha-1
(X)) 3 protein.
Length = 680
Score = 32.7 bits (71), Expect = 2.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 674 PGRPRXGGPKAHPQKPGXEREPGXG 600
PG+P GPK +P PG + +PG G
Sbjct: 391 PGKPGLDGPKGNPGLPGPKGDPGVG 415
>BC146776-1|AAI46777.1| 1542|Homo sapiens SET binding protein 1
protein.
Length = 1542
Score = 32.7 bits (71), Expect = 2.6
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXPKXXPFLGGKR 925
P P PPPL P PP PP PK GGKR
Sbjct: 1466 PPLPPPPPPPLPPPPPPPLPPPPPLPKTP--RGGKR 1499
>BC130623-1|AAI30624.1| 680|Homo sapiens collagen, type X, alpha
1(Schmid metaphyseal chondrodysplasia) protein.
Length = 680
Score = 32.7 bits (71), Expect = 2.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 674 PGRPRXGGPKAHPQKPGXEREPGXG 600
PG+P GPK +P PG + +PG G
Sbjct: 391 PGKPGLDGPKGNPGLPGPKGDPGVG 415
>BC130621-1|AAI30622.1| 680|Homo sapiens collagen, type X, alpha
1(Schmid metaphyseal chondrodysplasia) protein.
Length = 680
Score = 32.7 bits (71), Expect = 2.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 674 PGRPRXGGPKAHPQKPGXEREPGXG 600
PG+P GPK +P PG + +PG G
Sbjct: 391 PGKPGLDGPKGNPGLPGPKGDPGVG 415
>AL121963-4|CAB87590.1| 680|Homo sapiens collagen type X alpha 1
protein.
Length = 680
Score = 32.7 bits (71), Expect = 2.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 674 PGRPRXGGPKAHPQKPGXEREPGXG 600
PG+P GPK +P PG + +PG G
Sbjct: 391 PGKPGLDGPKGNPGLPGPKGDPGVG 415
>AB022660-1|BAA82444.1| 1542|Homo sapiens SET-binding protein (SEB)
protein.
Length = 1542
Score = 32.7 bits (71), Expect = 2.6
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXPKXXPFLGGKR 925
P P PPPL P PP PP PK GGKR
Sbjct: 1466 PPLPPPPPPPLPPPPPPPLPPPPPLPKTP--RGGKR 1499
>AB007897-1|BAA24826.2| 1605|Homo sapiens KIAA0437 protein.
Length = 1605
Score = 32.7 bits (71), Expect = 2.6
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXPKXXPFLGGKR 925
P P PPPL P PP PP PK GGKR
Sbjct: 1529 PPLPPPPPPPLPPPPPPPLPPPPPLPKTP--RGGKR 1562
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 31.9 bits (69), Expect = 4.5
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 827 PXGXPPPLXFXPXPPYXGGPPXPKXXPFL 913
P PPPL P PP GGPP P L
Sbjct: 348 PPPPPPPLPNSPAPPNPGGPPPAPPPPGL 376
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 31.1 bits (67), Expect = 7.8
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +3
Query: 198 PPPPXXKKXXXXXXFXXPPPPXXXXXXXFXXXXXXKKXXXXXXXPPPPPXXXXXG 362
PPPP F PPPP + PPPPP G
Sbjct: 347 PPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPG 401
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 31.1 bits (67), Expect = 7.8
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +3
Query: 198 PPPPXXKKXXXXXXFXXPPPPXXXXXXXFXXXXXXKKXXXXXXXPPPPPXXXXXG 362
PPPP F PPPP + PPPPP G
Sbjct: 347 PPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPG 401
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein
protein.
Length = 498
Score = 31.1 bits (67), Expect = 7.8
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +3
Query: 198 PPPPXXKKXXXXXXFXXPPPPXXXXXXXFXXXXXXKKXXXXXXXPPPPPXXXXXG 362
PPPP F PPPP + PPPPP G
Sbjct: 347 PPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPG 401
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,492,628
Number of Sequences: 237096
Number of extensions: 2344721
Number of successful extensions: 19872
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17631
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 15963406700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -