Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_N07
(1150 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 33 0.50
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.66
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.7
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 3.5
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen prot... 29 4.7
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 6.2
AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical ... 29 6.2
AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical ... 29 6.2
AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical ... 29 6.2
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 6.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.2
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 32.7 bits (71), Expect = 0.50
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 674 PGRPRXGGPKAHPQKPGXEREPG 606
PG+P GP HP KPG + PG
Sbjct: 184 PGQPGPHGPNGHPGKPGSQGPPG 206
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 32.3 bits (70), Expect = 0.66
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXPKXXP 907
PQ G PPP P PP GGPP P P
Sbjct: 569 PQNLSGAPPPPP--PPPPMLGGPPPPPPPP 596
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 818 PQXPXGXPPPLXF-XPXPPYXGGPPXP 895
PQ G PPP F P P GGPP P
Sbjct: 344 PQGSFGAPPPQQFHAPSPQSFGGPPPP 370
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXPKXXP 907
P G PPP PP GGPP P P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +2
Query: 797 PXXGFXXPQXPXGXPPPLXFXPXPPYX--GGPPXPKXXPFLGG 919
P G P P G PP+ P PP GG P P P GG
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXP 895
P P G PPP P + GGPP P
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.5 bits (63), Expect = 4.7
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +1
Query: 199 PPPXXKKKXXXXXFFXXPPPPXXXXXXFXXXXXXXKXXXXXXXPPPPPPXXXXXGGGFXP 378
PPP PPPP PPPPPP GG P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 379 XP 384
P
Sbjct: 787 PP 788
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXP 895
P G PPP PP GGPP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPP 745
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXPKXXP 907
P G PPP PP GGPP P P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +2
Query: 797 PXXGFXXPQXPXGXPPPLXFXPXPPYX--GGPPXPKXXPFLGG 919
P G P P G PP+ P PP GG P P P GG
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXP 895
P P G PPP P + GGPP P
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.5 bits (63), Expect = 4.7
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +1
Query: 199 PPPXXKKKXXXXXFFXXPPPPXXXXXXFXXXXXXXKXXXXXXXPPPPPPXXXXXGGGFXP 378
PPP PPPP PPPPPP GG P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 379 XP 384
P
Sbjct: 787 PP 788
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXP 895
P G PPP PP GGPP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPP 745
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXPKXXP 907
P G PPP PP GGPP P P
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +2
Query: 797 PXXGFXXPQXPXGXPPPLXFXPXPPYX--GGPPXPKXXPFLGG 919
P G P P G PP+ P PP GG P P P GG
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXP 895
P P G PPP P + GGPP P
Sbjct: 345 PPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 29.5 bits (63), Expect = 4.7
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +1
Query: 199 PPPXXKKKXXXXXFFXXPPPPXXXXXXFXXXXXXXKXXXXXXXPPPPPPXXXXXGGGFXP 378
PPP PPPP PPPPPP GG P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Query: 379 XP 384
P
Sbjct: 370 PP 371
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXP 895
P G PPP PP GGPP P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPP 328
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 888 GGPPX*GGXGXNXRGGGXPXGFWG 817
GGP GG G N GGG G WG
Sbjct: 27 GGPGRWGGWGGNRWGGGGGPGGWG 50
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 674 PGRPRXGGPKAHPQKPGXEREPG 606
PG+P GP HP +PG PG
Sbjct: 238 PGQPGQPGPDGHPGQPGNAGPPG 260
>AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen protein
72 protein.
Length = 205
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 671 GRPRXGGPKAHPQKPGXEREPG 606
GRP GP P +PG E +PG
Sbjct: 83 GRPGNNGPMGQPGEPGREGQPG 104
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPP 889
PQ P P P P PP+ GPP
Sbjct: 73 PQGPSDLPGPSGAPPGPPHPSGPP 96
>AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical
protein Y37A1B.2d protein.
Length = 564
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 839 PPPLXFXPXPPYXGGPPXPKXXPF 910
PPP+ P PP GPP PF
Sbjct: 64 PPPVLPPPLPPTSSGPPAASSRPF 87
>AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical
protein Y37A1B.2c protein.
Length = 566
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 839 PPPLXFXPXPPYXGGPPXPKXXPF 910
PPP+ P PP GPP PF
Sbjct: 64 PPPVLPPPLPPTSSGPPAASSRPF 87
>AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical
protein Y37A1B.2a protein.
Length = 164
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 839 PPPLXFXPXPPYXGGPPXPKXXPF 910
PPP+ P PP GPP PF
Sbjct: 64 PPPVLPPPLPPTSSGPPAASSRPF 87
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 677 DPGRPRXGGPKAHPQKPGXEREPG 606
+PG+P G HP +PG + PG
Sbjct: 245 EPGQPGRDGQPGHPGQPGKDGRPG 268
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 6.2
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 806 GFXXPQXPXGXPPPLXFXPXPPYXGGPPXPKXXPFLGG 919
G P P G P+ P P GGPP P GG
Sbjct: 1464 GRGGPPPPRGMNSPMRGMPPPMRGGGPPMRGGPPMRGG 1501
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 797 PXXGFXXPQXPXGXPPPLXFXPXPPYXGGPPXP 895
P G P PPP P PP GG P P
Sbjct: 259 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXPK 898
P+ PPP P PP G PP P+
Sbjct: 267 PRTGSPPPPPTGSPPPPPAGGSPPPPR 293
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = +2
Query: 818 PQXPXGXPPP--LXFXPXPPYXGGPPXP 895
P P G PPP P PP G PP P
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 797 PXXGFXXPQXPXGXPPPLXFXPXPPYXGGPPXP 895
P G P PPP P PP GG P P
Sbjct: 280 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXPK 898
P+ PPP P PP G PP P+
Sbjct: 288 PRTGSPPPPPTGSPPPPPAGGSPPPPR 314
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = +2
Query: 818 PQXPXGXPPP--LXFXPXPPYXGGPPXP 895
P P G PPP P PP G PP P
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 797 PXXGFXXPQXPXGXPPPLXFXPXPPYXGGPPXP 895
P G P PPP P PP GG P P
Sbjct: 265 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 818 PQXPXGXPPPLXFXPXPPYXGGPPXPK 898
P+ PPP P PP G PP P+
Sbjct: 273 PRTGSPPPPPTGSPPPPPAGGSPPPPR 299
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = +2
Query: 818 PQXPXGXPPP--LXFXPXPPYXGGPPXP 895
P P G PPP P PP G PP P
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,255,007
Number of Sequences: 27780
Number of extensions: 279076
Number of successful extensions: 3034
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2629
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3119902942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -