Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_M18
         (802 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    26   0.35 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   3.3  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   5.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   5.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   7.6  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 711 PPXPXPPPPXPXPS 752
           PP P PPPP P  S
Sbjct: 338 PPKPAPPPPPPSSS 351



 Score = 25.4 bits (53), Expect = 0.62
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 705 PPPPXPXPPPP 737
           PP P P PPPP
Sbjct: 338 PPKPAPPPPPP 348



 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 696 NTXPPPPXPXPPPPXPXP 749
           +T P P  P PPP    P
Sbjct: 336 DTPPKPAPPPPPPSSSGP 353


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -1

Query: 241 TPIGXTXLIKPGWVPPXYGXSVSLGXKVWR*KPG 140
           T IG T LIK   +P  YG    +  K     PG
Sbjct: 41  TAIGQTPLIKLNNIPKSYGIKCEIYAKCEFLNPG 74


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 59  FVTCFQMITTAPR*RLTLVCLRPR 130
           F + + M TT+P+ + T+  LRP+
Sbjct: 392 FPSLYPMATTSPQSQSTIQTLRPQ 415


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +3

Query: 690 PHNTXPPPPXPXPPPPXP 743
           P    PP P   PPP  P
Sbjct: 34  PQRGSPPNPSQGPPPGGP 51


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 726  PPPPXPXPS 752
            PPPP P PS
Sbjct: 1355 PPPPPPPPS 1363


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.141    0.472 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,907
Number of Sequences: 438
Number of extensions: 8500
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)