Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_M15
         (904 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106575-15|AAC78164.2|  350|Caenorhabditis elegans Serpentine r...    30   2.6  
AF078782-1|AAC26913.1|  361|Caenorhabditis elegans Hypothetical ...    28   7.9  

>AF106575-15|AAC78164.2|  350|Caenorhabditis elegans Serpentine
           receptor, class w protein91 protein.
          Length = 350

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/63 (25%), Positives = 32/63 (50%)
 Frame = +2

Query: 119 YLLNAHASNFGYVLFVLFIVIFSNN**EMYNLKEIPTTSECCFIIIYFLFVLNVTPSNCC 298
           +L++ +AS   Y    +FI  F ++    +++      S C ++ I F+ +   TP+NCC
Sbjct: 137 FLVSKYASEVRYQKMSMFIFGFKSS---AFSVFISSLMSSCFYLCIKFVEIGTWTPANCC 193

Query: 299 IRL 307
             +
Sbjct: 194 TNI 196


>AF078782-1|AAC26913.1|  361|Caenorhabditis elegans Hypothetical
           protein H34P18.1 protein.
          Length = 361

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +2

Query: 161 FVLFIVIFSNN**EMYNL--KEIPTTSECCFIIIYFLFVLNVTPSNCCIRLVCL 316
           F+LF+ +  N   E  +L   ++   SEC F+ IYF+    + P   C+ ++ L
Sbjct: 175 FILFMNVVKNTEEEGIHLDISDLSLFSECLFLKIYFIARNTIFPIAPCVLMLIL 228


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,885,351
Number of Sequences: 27780
Number of extensions: 90656
Number of successful extensions: 201
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)