Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_M13
         (874 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.3  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   5.3  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 18/88 (20%), Positives = 34/88 (38%)
 Frame = +2

Query: 248 PXNDKNVLSAIGSAEFNDRHKLSAASXGTRSTQRKRARAESDRDPXXRLRGAARXXRXXQ 427
           P N   +L  +G    ++R KL       R  + +RAR   +           R  R  +
Sbjct: 422 PPNLYGMLPGMGMQSIHERMKLEEEHRAARLREEERAREAREAAIEREKERELREQRERE 481

Query: 428 LVPQ*QPRPERQGVRDQELSQRHPQRAQ 511
              + Q   E++   ++E  QR  ++ +
Sbjct: 482 QREKEQREKEQREKEERERQQREKEQRE 509


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 523 WAAEWTTCSNRRWAHR 570
           W AE  T  + RWAHR
Sbjct: 881 WDAEADTSRHTRWAHR 896


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,908
Number of Sequences: 2352
Number of extensions: 12603
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)