Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_M12
(938 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0799 - 6273520-6274008,6274137-6274151 34 0.19
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 31 1.0
09_06_0186 + 21427739-21428813,21428894-21428977,21429136-21429254 31 1.7
01_05_0560 - 23288078-23288370,23288448-23288733 30 3.1
12_02_1193 + 26891619-26892456,26892545-26893884 29 5.3
04_04_0859 + 28805836-28805842,28806405-28806492,28807474-288075... 29 5.3
01_01_0206 - 1770622-1771347 29 5.3
04_04_0666 + 27086568-27086975,27087073-27087477,27088542-270886... 29 7.1
09_06_0184 - 21413275-21414267 28 9.3
08_02_1620 - 28288152-28288353,28288469-28288557,28288634-282888... 28 9.3
07_01_0325 + 2275922-2276013,2276467-2276500,2276810-2276932,227... 28 9.3
03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478 28 9.3
>07_01_0799 - 6273520-6274008,6274137-6274151
Length = 167
Score = 33.9 bits (74), Expect = 0.19
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2
Query: 211 PACRTVRVIGRCVGGGTEGRLDEPLARSLSKE 116
P CRT+ V G+C+GGG G +DE + R ++
Sbjct: 67 PRCRTM-VKGQCIGGGAAGNVDEQVWRDCCRQ 97
>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 249 PRAPSTADHPILPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHT 389
P P T H I S +DD+ R VR +P+N ++ + S +T
Sbjct: 2064 PEPPETGTHRIEFSAVDDMDTGSCRSPVRDTPDPDNQKSELSGSGNT 2110
>09_06_0186 + 21427739-21428813,21428894-21428977,21429136-21429254
Length = 425
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 146 IQPTFSATANTAPDNTYSATSWPGTAMAVSR*QCSSCAKYRRP 274
+QP+ TAN P N S TS P ++A ++ CSS A P
Sbjct: 153 VQPSIIVTANPPPRNVVSTTSVPQNSIA-AKLACSSVAAASPP 194
>01_05_0560 - 23288078-23288370,23288448-23288733
Length = 192
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 246 VPRAPSTADHPILPSKIDDVQLDPNRRYVRS 338
+PR P A H +L S DDV DP+ RYV S
Sbjct: 120 LPR-PLRAGHYVLSSPPDDVDHDPDHRYVFS 149
>12_02_1193 + 26891619-26892456,26892545-26893884
Length = 725
Score = 29.1 bits (62), Expect = 5.3
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Frame = +3
Query: 201 RQAGQEPLWLYQGDNVPRA-PSTADHPILPSK---IDDVQLDPNRRYV--RSVTNPENNE 362
RQA W+Y G+ PRA P AD PS+ V+L P +R V S ++ ++ +
Sbjct: 308 RQAAGRANWVYNGELPPRANPQKADDEAGPSQKRMRGQVKLAPKKRRVPPSSDSDADDED 367
Query: 363 ASIEH 377
+ EH
Sbjct: 368 DAEEH 372
>04_04_0859 +
28805836-28805842,28806405-28806492,28807474-28807558,
28807638-28807763,28807819-28807968,28808497-28808541,
28808612-28808875,28809843-28809887,28810395-28810430,
28812048-28812816,28813063-28813925,28814024-28814182,
28814440-28814558,28815356-28815417,28816677-28816805,
28817395-28817460,28817757-28817890,28818025-28818162,
28818630-28818889,28818996-28819107,28819590-28819675,
28820655-28820735,28822841-28822928,28823222-28823260,
28823847-28823964,28824063-28824130,28824884-28824981,
28825238-28825397,28825691-28825816,28825876-28825945,
28826046-28826449
Length = 1664
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 TSRSRATVTQGTCGFCTLEGNCLFQRFL-RLTPSQYILIWETRYRRHAS 549
T ++ T QGTC +C+ +G+ L+ + ++ S + + ++ R+ S
Sbjct: 151 TKKADGTTIQGTCKYCSKDGSKLYPSIIFKMLTSPRVTLSRSKLHRNTS 199
>01_01_0206 - 1770622-1771347
Length = 241
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +3
Query: 450 LYPRGKL-PVPTLPPFNPKP 506
L+ GKL PVP LPP +PKP
Sbjct: 68 LFAGGKLLPVPPLPPVHPKP 87
>04_04_0666 +
27086568-27086975,27087073-27087477,27088542-27088635,
27088731-27088768,27088853-27088999,27089167-27089266,
27090001-27090953,27091512-27091569,27092904-27093022
Length = 773
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 417 ESHRNTRDLRFLYPRGKLPVPTLPPFNPKPIYIDMGNPLPTT 542
++HR +DLRF+ P + + + F + IY++M PLP T
Sbjct: 160 KTHRVRKDLRFIAPTVEEAISWVTCFAEQNIYVNM-LPLPPT 200
>09_06_0184 - 21413275-21414267
Length = 330
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +3
Query: 468 LPVPTLPPFNPKPIYIDMGNPLPTTCVGGSXRIAAI**APSDSEGYXPRLG 620
LP P PP P+Y +G P T C + + +PSD + P +G
Sbjct: 6 LPPPPFPPSLRLPVY--LGGPSLTPCTASEVHLPPLWSSPSDR--WSPHIG 52
>08_02_1620 - 28288152-28288353,28288469-28288557,28288634-28288828,
28289082-28289423,28290227-28291672,28292590-28292666,
28293160-28294509,28295921-28296029,28296896-28297007,
28297800-28297957
Length = 1359
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 339 VTNPENNEASIEH-SHHTVDIGLDQPIESHRNTRDLRFLYPRGKLPVPTLPPFNPKPIYI 515
+++P+N +AS SHH+ + + S T +P P+ PP P PI +
Sbjct: 946 ISSPQNLQASSPQISHHSPQVDQHNLLPSQVKTGTPLQSANSPYMPSPS-PPVAPSPIPV 1004
Query: 516 DMGNPL 533
D PL
Sbjct: 1005 DSEKPL 1010
>07_01_0325 +
2275922-2276013,2276467-2276500,2276810-2276932,
2277334-2277401,2277494-2277585,2278662-2278987,
2280771-2281142
Length = 368
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 40 DFDLVFNLIQSTCTMFLVFSSVLGAVLCSG 129
+FD NL+ C ++ ++S +G+V+C G
Sbjct: 169 EFDRAHNLLSVDCMLWPPYASCVGSVVCHG 198
>03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478
Length = 772
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 119 FAQASCQRFIQPTFSATANTAPDNTYSATSWPGTAMAVSR*QC 247
F +C ++ PT SA T N + +S PGT R C
Sbjct: 101 FLGTACADWVMPTSSAPRQTLSSNIHRNSSRPGTPAPSGRLLC 143
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,995,606
Number of Sequences: 37544
Number of extensions: 475883
Number of successful extensions: 1349
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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