Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_M11
(1100 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 39 0.007
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 38 0.013
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 35 0.090
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 35 0.090
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.9
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 31 1.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.9
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 2.5
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 3.4
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 3.4
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 3.4
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 3.4
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.5
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 4.5
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 4.5
AL023858-2|CAE18058.1| 158|Caenorhabditis elegans Hypothetical ... 29 4.5
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 29 4.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.5
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 4.5
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 29 5.9
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 29 5.9
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 29 5.9
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 5.9
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 7.8
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 7.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 7.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 7.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 7.8
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 7.8
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 38.7 bits (86), Expect = 0.007
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -2
Query: 580 CXGGXGXXGGAXGGG*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXGG 437
C GG G GG GGG G G G G G C G GG
Sbjct: 118 CGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGG 165
Score = 35.1 bits (77), Expect = 0.090
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -2
Query: 580 CXGGXGXXGGAXGGG*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXGG 437
C GG G GG GGG G G G G C G GG
Sbjct: 61 CGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGG 108
Score = 33.9 bits (74), Expect = 0.21
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXG-GG*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXGG 437
G G C GG G GG G GG G G G G C G GG
Sbjct: 69 GGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGG 127
Score = 32.7 bits (71), Expect = 0.48
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGGG*AXXAXSGXGXGXG 494
G G C GG G GG GGG G G G G
Sbjct: 153 GGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGGGCG 191
Score = 31.9 bits (69), Expect = 0.83
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGGG*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXGG 437
G G C GG G GG GG G G G G G C G GG
Sbjct: 119 GGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGG----GGGCGGGGGGCGG 172
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGGG*AXXAXSGXGXGXGXG 488
G G C GG G GG G G G G G G G
Sbjct: 62 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGG 102
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGGG*AXXAXSGXGXGXGXG 488
G G C GG G GG GG G G G G G
Sbjct: 139 GGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCG 179
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -2
Query: 574 GGXGXXGGAXGGG*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXGG 437
GG G GG GGG G G G G G G GG
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGG 68
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGGG*AXXAXSGXGXGXGXG 488
G G GG G GG GGG G G G G G
Sbjct: 135 GGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 175
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 574 GGXGXXGGAXGGG*AXXAXSGXGXGXGXG 488
GG G GG GGG G G G G G
Sbjct: 161 GGCGGGGGGCGGGGGGGCGGGGGGGCGGG 189
Score = 29.1 bits (62), Expect = 5.9
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 5/63 (7%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXG-XXGGAXGGG*A----XXAXSGXGXGXGXGXXXXXXXCXSGXXX 446
G G C GG G GG GGG A A G G G G C G
Sbjct: 26 GGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGC 85
Query: 445 XGG 437
GG
Sbjct: 86 GGG 88
Score = 28.7 bits (61), Expect = 7.8
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGGG*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXGG 437
G G C GG G G GGG G G G G G GG
Sbjct: 131 GGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGG 188
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 37.9 bits (84), Expect = 0.013
Identities = 24/86 (27%), Positives = 25/86 (29%), Gaps = 7/86 (8%)
Frame = +3
Query: 360 PPGXXXXQXRAXXPGXTXQXXPXHTNPPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQ- 536
PP Q P P + P P P P P P P A A
Sbjct: 67 PPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPA 126
Query: 537 ------PPPXAPPXXPXPPXHXEXXP 596
PPP PP P PP H P
Sbjct: 127 PYQQQPPPPPPPPHYPPPPPHYPPPP 152
Score = 32.3 bits (70), Expect = 0.63
Identities = 20/74 (27%), Positives = 20/74 (27%), Gaps = 3/74 (4%)
Frame = +3
Query: 360 PPGXXXXQXRAXXPGXTXQXXPXHTNPPXXXXPXXQXXXXXXXPXPX---PXPXPXKAXX 530
PP Q P P H P P P P P P P
Sbjct: 82 PPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHY 141
Query: 531 AQPPPXAPPXXPXP 572
PPP PP P P
Sbjct: 142 PPPPPHYPPPPPAP 155
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 489 PXPXPXPXPXKAXXAQPPPXAPPXXPXP 572
P P P P P AQP APP P P
Sbjct: 29 PPPPPKPAPYVEQSAQPQQTAPPPPPAP 56
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +3
Query: 423 PXHTNPPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXA 551
P T PP P Q P P P P P A A PP A
Sbjct: 45 PQQTAPPPPPAPYPQQAVPA--PAPPPAPYPQHAVPAPAPPLA 85
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 36.3 bits (80), Expect = 0.039
Identities = 22/77 (28%), Positives = 25/77 (32%)
Frame = +3
Query: 456 PXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXAPPXXPXPPXHXEXXPXXXXPRXRTXXXX 635
P Q P P P P +A + PPP PP P P P P R
Sbjct: 111 PAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTP------PPRSPPPRRPPMTP 164
Query: 636 XXXRRXPPXXXPXGRXR 686
+R PP P R
Sbjct: 165 PSPQRRPPRTPPSPEPR 181
Score = 31.9 bits (69), Expect = 0.83
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +3
Query: 414 QXXPXHTNPPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXAPPXXPXPP 575
Q +PP P P P P P PPP PP P P
Sbjct: 114 QHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSP 167
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 35.1 bits (77), Expect = 0.090
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -2
Query: 580 CXGGXGXXGGAXGGG*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXGG 437
C GG G GG GGG G G G G C G GG
Sbjct: 79 CGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 126
Score = 32.7 bits (71), Expect = 0.48
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGGG*AXXAXSGXGXGXGXG 488
G G C GG G GG GGG + G G G G
Sbjct: 114 GGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGG 154
Score = 32.3 bits (70), Expect = 0.63
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 6/64 (9%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXX------GGAXGGG*AXXAXSGXGXGXGXGXXXXXXXCXSGXX 449
G G C GG G GG GGG G G G G G C G
Sbjct: 56 GGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 115
Query: 448 XXGG 437
GG
Sbjct: 116 GCGG 119
Score = 32.3 bits (70), Expect = 0.63
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXG--GG*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXGG 437
G G C GG G GG G GG G G G G G SG GG
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Score = 31.9 bits (69), Expect = 0.83
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGGG*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXGG 437
G G C GG G GG G G G G G G G C G GG
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGG----GGGCGGGGGGCGG 133
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXX-GGAXGGG*AXXAXSGXGXGXGXG-XXXXXXXCXSGXXXXGG 437
G G C GG G GG GG + G G G G G C G GG
Sbjct: 121 GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGG 180
Query: 436 F 434
+
Sbjct: 181 Y 181
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGG-G*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXG 440
G G C GG G GG GG G G G G G G SG G
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGG 150
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGX-GXXGGAXGGG*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXGG 437
G G C GG G GG GGG G G G G G GG
Sbjct: 137 GGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGG 195
Score = 29.5 bits (63), Expect = 4.5
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = -2
Query: 580 CXGGXGXXGGAXGGG*A---XXAXSGXG-XGXGXGXXXXXXXCXSGXXXXGG 437
C GG G GG GGG A G G G G G C G GG
Sbjct: 55 CGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGG 106
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 35.1 bits (77), Expect = 0.090
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -2
Query: 580 CXGGXGXXGGAXGGG*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXGG 437
C GG G GG GGG G G G G C G GG
Sbjct: 79 CGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 126
Score = 32.7 bits (71), Expect = 0.48
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGGG*AXXAXSGXGXGXGXG 488
G G C GG G GG GGG + G G G G
Sbjct: 114 GGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGG 154
Score = 32.3 bits (70), Expect = 0.63
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 6/64 (9%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXX------GGAXGGG*AXXAXSGXGXGXGXGXXXXXXXCXSGXX 449
G G C GG G GG GGG G G G G G C G
Sbjct: 56 GGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 115
Query: 448 XXGG 437
GG
Sbjct: 116 GCGG 119
Score = 32.3 bits (70), Expect = 0.63
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXG--GG*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXGG 437
G G C GG G GG G GG G G G G G SG GG
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Score = 31.9 bits (69), Expect = 0.83
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGGG*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXGG 437
G G C GG G GG G G G G G G G C G GG
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGG----GGGCGGGGGGCGG 133
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXX-GGAXGGG*AXXAXSGXGXGXGXG-XXXXXXXCXSGXXXXGG 437
G G C GG G GG GG + G G G G G C G GG
Sbjct: 121 GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGG 180
Query: 436 F 434
+
Sbjct: 181 Y 181
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGG-G*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXG 440
G G C GG G GG GG G G G G G G SG G
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGG 150
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGX-GXXGGAXGGG*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXGG 437
G G C GG G GG GGG G G G G G GG
Sbjct: 137 GGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGG 195
Score = 29.5 bits (63), Expect = 4.5
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = -2
Query: 580 CXGGXGXXGGAXGGG*A---XXAXSGXG-XGXGXGXXXXXXXCXSGXXXXGG 437
C GG G GG GGG A G G G G G C G GG
Sbjct: 55 CGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGG 106
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 489 PXPXPXPXPXKAXXAQPPPXAPPXXPXPP 575
P P P P PPP PP P PP
Sbjct: 42 PLPCPPPPICPPQFCPPPPMCPPPPPPPP 70
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/63 (26%), Positives = 20/63 (31%)
Frame = +3
Query: 399 PGXTXQXXPXHTNPPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXAPPXXPXPPX 578
P T + P + P Q P P P P + PPP PP P P
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPPAL 525
Query: 579 HXE 587
E
Sbjct: 526 EQE 528
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 30.7 bits (66), Expect = 1.9
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGGG*AXXAXSGXGXGXGXG 488
G G C GG G GG GGG G G G G G
Sbjct: 92 GGGCGGGGGGCGGGGGC-GGGGGGGCGGGGGGGCGGGGGGG 131
Score = 28.7 bits (61), Expect = 7.8
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = -2
Query: 580 CXGGXGXXGGAXG--GG*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXGGF 434
C GG G GG G GG G G G G G SG GGF
Sbjct: 95 CGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGGGGGYASG--GSGGF 143
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGGG*AXXAXSGXGXGXGXG 488
G G C GG G G GGG G G G G
Sbjct: 98 GGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGGGGGYASG 138
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +3
Query: 438 PPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXAPPXXPXPP 575
PP P P P P P PPP P P PP
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP 311
Score = 28.7 bits (61), Expect = 7.8
Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 1/58 (1%)
Frame = +3
Query: 489 PXPXPXPXPXKAXXAQPP-PXAPPXXPXPPXHXEXXPXXXXPRXRTXXXXXXXRRXPP 659
P P P P PP P P P PP P P RT PP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 319
Score = 28.7 bits (61), Expect = 7.8
Identities = 21/87 (24%), Positives = 22/87 (25%), Gaps = 3/87 (3%)
Frame = +3
Query: 360 PPGXXXXQXRAXXPGXTXQXXPXHTNPPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQP 539
PP PG P PP P P P P + A P
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 360
Query: 540 ---PPXAPPXXPXPPXHXEXXPXXXXP 611
PP P P PP P P
Sbjct: 361 GMYPPPPPSRPPAPPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +3
Query: 438 PPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXAPPXXPXPP 575
PP P P P P P PPP P P PP
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP 321
Score = 28.7 bits (61), Expect = 7.8
Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 1/58 (1%)
Frame = +3
Query: 489 PXPXPXPXPXKAXXAQPP-PXAPPXXPXPPXHXEXXPXXXXPRXRTXXXXXXXRRXPP 659
P P P P PP P P P PP P P RT PP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 329
Score = 28.7 bits (61), Expect = 7.8
Identities = 21/87 (24%), Positives = 22/87 (25%), Gaps = 3/87 (3%)
Frame = +3
Query: 360 PPGXXXXQXRAXXPGXTXQXXPXHTNPPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQP 539
PP PG P PP P P P P + A P
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 370
Query: 540 ---PPXAPPXXPXPPXHXEXXPXXXXP 611
PP P P PP P P
Sbjct: 371 GMYPPPPPSRPPAPPSGHGMIPPPPPP 397
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 495 PXPXPXPXKAXXAQPPPXAPPXXPXPPXH 581
P P P P +PPP PP P P +
Sbjct: 153 PPPTPIPTPVPILEPPPPPPPVPPLSPLY 181
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = +3
Query: 489 PXPXPXPXPXKAXXAQPPPXAPP---XXPXPP 575
P P P P P A PPP PP P PP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.3 bits (65), Expect = 2.5
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +3
Query: 489 PXPX-PXPXPXKAXXAQPPPXAPPXXPXPPXHXEXXPXXXXPR 614
P P P P P A PPP PP P PP P PR
Sbjct: 50 PMPVCPPPPPCPAQFCPPPPICPP--PPPPPMPCPPPPPPMPR 90
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +3
Query: 438 PPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXAPPXXPXPP 575
PP + P P P P P A PP P P PP
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPP 793
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +3
Query: 438 PPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXAPPXXPXPP 575
PP + P P P P P A PP P P PP
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPP 793
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +3
Query: 438 PPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXAPPXXPXPP 575
PP + P P P P P A PP P P PP
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPP 793
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +3
Query: 438 PPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXAPPXXPXPP 575
PP + P P P P P A PP P P PP
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPP 793
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGGG*AXXAXSGXGXGXGXG 488
G G GG G GG GGG G G G G G
Sbjct: 78 GGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGG 118
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 4.5
Identities = 18/72 (25%), Positives = 18/72 (25%)
Frame = +3
Query: 360 PPGXXXXQXRAXXPGXTXQXXPXHTNPPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQP 539
PPG P P PP P P P P P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 540 PPXAPPXXPXPP 575
PP P PP
Sbjct: 776 PPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 4.5
Identities = 18/72 (25%), Positives = 18/72 (25%)
Frame = +3
Query: 360 PPGXXXXQXRAXXPGXTXQXXPXHTNPPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQP 539
PPG P P PP P P P P P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 540 PPXAPPXXPXPP 575
PP P PP
Sbjct: 776 PPGGFKGGPPPP 787
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.5 bits (63), Expect = 4.5
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGGG*AXXAXSGXGXGXGXGXXXXXXXCXSGXXXXGGF 434
G G S GG G GG GGG G G G G G GGF
Sbjct: 40 GDILGGLASNFFGGGGGGGGGGGGG--GFGGGNGGFGGGGGGNYGGGGGNQGGGGGGGF 96
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 574 GGXGXXGGAXGGG*AXXAXSGXGXGXGXG 488
GG G GG GGG G G G G G
Sbjct: 57 GGGGGGGGGFGGGNGGFGGGGGGSGGGGG 85
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGGG*AXXAXSGXGXGXG 494
G G S GG G GG GGG G G G G
Sbjct: 40 GDILGGLASNFFGGGGGGGGGGGGGGFGGGNGGFGGGGG 78
>AL023858-2|CAE18058.1| 158|Caenorhabditis elegans Hypothetical
protein ZK285.2 protein.
Length = 158
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -2
Query: 574 GGXGXXGGAXGGG*AXXAXSGXGXGXGXG 488
GG G GGA G G A A G G G G
Sbjct: 87 GGGGGAGGAGGAGGAGGAGGSGGSGSGNG 115
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = -2
Query: 595 GXXSXCXGGXGXXGGAX-GGG*AXXAXSGXGXGXGXG 488
G C GG G GG GGG G G G G G
Sbjct: 26 GGAGGCGGGGGCGGGGGCGGGCGYGGGGGCGYGGGYG 62
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 4.5
Identities = 18/72 (25%), Positives = 18/72 (25%)
Frame = +3
Query: 360 PPGXXXXQXRAXXPGXTXQXXPXHTNPPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQP 539
PPG P P PP P P P P P P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Query: 540 PPXAPPXXPXPP 575
PP P PP
Sbjct: 359 PPGGFKGGPPPP 370
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 574 GGXGXXGGAXGGG*AXXAXSGXGXGXGXG 488
GG G GG GGG G G G G G
Sbjct: 100 GGGGGYGGGHGGGHGGAVGGGYGGGGGGG 128
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/83 (22%), Positives = 22/83 (26%)
Frame = +3
Query: 423 PXHTNPPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXAPPXXPXPPXHXEXXPXX 602
P + PP P + P PP + P P PP H E
Sbjct: 518 PRSSQPPPLMSPVSRHNSMSSTGRPASIQTLRHQSVMFPPDVSIPPPPIPPTHDEMMAPR 577
Query: 603 XXPRXRTXXXXXXXRRXPPXXXP 671
P R R PP P
Sbjct: 578 GTPPSRRSSETMVPLRSPPFGTP 600
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/83 (22%), Positives = 22/83 (26%)
Frame = +3
Query: 423 PXHTNPPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXAPPXXPXPPXHXEXXPXX 602
P + PP P + P PP + P P PP H E
Sbjct: 809 PRSSQPPPLMSPVSRHNSMSSTGRPASIQTLRHQSVMFPPDVSIPPPPIPPTHDEMMAPR 868
Query: 603 XXPRXRTXXXXXXXRRXPPXXXP 671
P R R PP P
Sbjct: 869 GTPPSRRSSETMVPLRSPPFGTP 891
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/83 (22%), Positives = 22/83 (26%)
Frame = +3
Query: 423 PXHTNPPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXAPPXXPXPPXHXEXXPXX 602
P + PP P + P PP + P P PP H E
Sbjct: 824 PRSSQPPPLMSPVSRHNSMSSTGRPASIQTLRHQSVMFPPDVSIPPPPIPPTHDEMMAPR 883
Query: 603 XXPRXRTXXXXXXXRRXPPXXXP 671
P R R PP P
Sbjct: 884 GTPPSRRSSETMVPLRSPPFGTP 906
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/83 (22%), Positives = 22/83 (26%)
Frame = +3
Query: 423 PXHTNPPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXAPPXXPXPPXHXEXXPXX 602
P + PP P + P PP + P P PP H E
Sbjct: 824 PRSSQPPPLMSPVSRHNSMSSTGRPASIQTLRHQSVMFPPDVSIPPPPIPPTHDEMMAPR 883
Query: 603 XXPRXRTXXXXXXXRRXPPXXXP 671
P R R PP P
Sbjct: 884 GTPPSRRSSETMVPLRSPPFGTP 906
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/83 (22%), Positives = 22/83 (26%)
Frame = +3
Query: 423 PXHTNPPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXAPPXXPXPPXHXEXXPXX 602
P + PP P + P PP + P P PP H E
Sbjct: 518 PRSSQPPPLMSPVSRHNSMSSTGRPASIQTLRHQSVMFPPDVSIPPPPIPPTHDEMMAPR 577
Query: 603 XXPRXRTXXXXXXXRRXPPXXXP 671
P R R PP P
Sbjct: 578 GTPPSRRSSETMVPLRSPPFGTP 600
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/83 (22%), Positives = 22/83 (26%)
Frame = +3
Query: 423 PXHTNPPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXAPPXXPXPPXHXEXXPXX 602
P + PP P + P PP + P P PP H E
Sbjct: 809 PRSSQPPPLMSPVSRHNSMSSTGRPASIQTLRHQSVMFPPDVSIPPPPIPPTHDEMMAPR 868
Query: 603 XXPRXRTXXXXXXXRRXPPXXXP 671
P R R PP P
Sbjct: 869 GTPPSRRSSETMVPLRSPPFGTP 891
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/83 (22%), Positives = 22/83 (26%)
Frame = +3
Query: 423 PXHTNPPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXAPPXXPXPPXHXEXXPXX 602
P + PP P + P PP + P P PP H E
Sbjct: 824 PRSSQPPPLMSPVSRHNSMSSTGRPASIQTLRHQSVMFPPDVSIPPPPIPPTHDEMMAPR 883
Query: 603 XXPRXRTXXXXXXXRRXPPXXXP 671
P R R PP P
Sbjct: 884 GTPPSRRSSETMVPLRSPPFGTP 906
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/83 (22%), Positives = 22/83 (26%)
Frame = +3
Query: 423 PXHTNPPXXXXPXXQXXXXXXXPXPXPXPXPXKAXXAQPPPXAPPXXPXPPXHXEXXPXX 602
P + PP P + P PP + P P PP H E
Sbjct: 824 PRSSQPPPLMSPVSRHNSMSSTGRPASIQTLRHQSVMFPPDVSIPPPPIPPTHDEMMAPR 883
Query: 603 XXPRXRTXXXXXXXRRXPPXXXP 671
P R R PP P
Sbjct: 884 GTPPSRRSSETMVPLRSPPFGTP 906
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 5.9
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 489 PXPXPXPXPXKAXXAQPPPXAPPXXPXPP 575
P P P P P + Q PP PP P PP
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPP--PPPP 93
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +3
Query: 489 PXPXPXPXPXKAXXAQPPPXAPPXXPXPP 575
P P P P P + P P P P PP
Sbjct: 86 PAPLPPPPPPASPCCGPSPVPAPCCPPPP 114
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGGG*AXXAXSGXGXGXGXG 488
G G GG G GG+ GGG + SG G G G G
Sbjct: 791 GGGNGGSGGGGGGGGGGSGGSGGGG--SNSNSGGGGGNGGG 829
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 489 PXPXPXPXPXKAXXAQPPPXAPPXXPXPP 575
P P P P A + PPP A P PP
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 489 PXPXPXPXPXKAXXAQPPPXAPPXXPXPP 575
P P P P A + PPP A P PP
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 489 PXPXPXPXPXKAXXAQPPPXAPPXXPXPP 575
P P P P A + PPP A P PP
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 610 GXXXXGXXSXCXGGXGXXGGAXGGG*AXXAXSGXGXGXGXG 488
G G + GG GGA GG SG G G G G
Sbjct: 330 GGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGG 370
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,574,495
Number of Sequences: 27780
Number of extensions: 124540
Number of successful extensions: 1879
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2971275592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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