Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_M08
(1075 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 36 0.042
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 32 0.90
08_02_1084 - 24232968-24234779 31 2.1
08_01_0059 - 394001-394708 31 2.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 4.8
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 4.8
04_03_0904 + 20717005-20718087 29 4.8
03_01_0515 - 3864796-3865425 29 4.8
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 6.3
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 29 8.4
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 36.3 bits (80), Expect = 0.042
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 745 PXXPXXXPXXPXXASPXPXSXPXXXXXAPXPXSXXPPXXSXLPPXPP 885
P P P P A+P P P P P PP + PP PP
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPP 357
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 31.9 bits (69), Expect = 0.90
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +1
Query: 766 PXXPXXASPX-PXSXPXXXXXAPXPXSXXPPXXSXLPPXPP 885
P P ASP P + P P P PP S PP PP
Sbjct: 56 PTSPPPASPPLPSATPPLAASPPPPPPPPPPRNSPSPPKPP 96
>08_02_1084 - 24232968-24234779
Length = 603
Score = 30.7 bits (66), Expect = 2.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 775 PXXASPXPXSXPXXXXXAPXPXSXXPPXXSXLPPXPP 885
P P P P P P PP LPP PP
Sbjct: 62 PSLPPPLPQKQPPSQQLPPPPQQQQPPPQHSLPPPPP 98
>08_01_0059 - 394001-394708
Length = 235
Score = 30.7 bits (66), Expect = 2.1
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +1
Query: 754 PXXXPXXPXXASPXPXSXPXXXXXAPXPXSXXPPXXS-XLPPXPP 885
P P P +P P S P P P PP S L P PP
Sbjct: 13 PPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPP 57
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 766 PXXPXXASPXPXSXPXXXXXAPXPXSXXPPXXSXLPPXP 882
P P A P P + P AP P S PP PP P
Sbjct: 4 PPPPRRAPPPPATPPPPPRRAPPPPS--PPIRPPPPPTP 40
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 745 PXXPXXXPXXPXXASPXPXSXPXXXXXAPXPXSXXPPXXSXLPPXPP 885
P P P P P P P P P S LPP PP
Sbjct: 592 PPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPP 638
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.5 bits (63), Expect = 4.8
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 2/49 (4%)
Frame = +1
Query: 745 PXXPXXXPXXPXXASPX--PXSXPXXXXXAPXPXSXXPPXXSXLPPXPP 885
P P P P SP P P P P PP PP PP
Sbjct: 1162 PSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPP 1210
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/58 (25%), Positives = 17/58 (29%)
Frame = +3
Query: 870 PSTSPXXVXXLXXPIXXRSTXSPXLXDPAXXPNSXXAPLXXXXPXXXPPPYTPXXXXP 1043
P+ P P T +P P P P P P PYTP P
Sbjct: 87 PTPKPTPPPYTPKPTPPAHTPTPPTYTPTPTPPKPTPPTYKPQPKPTPAPYTPTPTPP 144
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 745 PXXPXXXPXXPXXASPXPXSXPXXXXXAPXPXSXXPPXXSXLPPXPP 885
P P P ASP P + P +P P + P +PP PP
Sbjct: 33 PEAEASPPSPPTEASPPPLAPPPSVTSSPPPPAAGP----LMPPPPP 75
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.1 bits (62), Expect = 6.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 754 PXXXPXXPXXASPXPXSXPXXXXXAPXPXSXXPPXXSXLPPXPP 885
P P P A P P P P P P PP PP
Sbjct: 338 PSPRPVQPSNAPPPPPPPPPPPPPPPPPKLNTAPKPPPPPPPPP 381
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/52 (26%), Positives = 15/52 (28%)
Frame = +1
Query: 745 PXXPXXXPXXPXXASPXPXSXPXXXXXAPXPXSXXPPXXSXLPPXPPXXXXG 900
P P P +P P P P PP PP PP G
Sbjct: 557 PVMPPPIPKLLSPPAPQAPMPPLKASPVPPPEPSPPPAPKAAPPPPPPKSTG 608
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,792,584
Number of Sequences: 37544
Number of extensions: 131563
Number of successful extensions: 891
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3199551704
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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