Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_M07
         (853 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0642 + 18289461-18290897,18291586-18291666                       33   0.22 
02_01_0051 - 385738-385968,386439-386864                               29   6.2  

>04_03_0642 + 18289461-18290897,18291586-18291666
          Length = 505

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = +1

Query: 13  DSL*GILKIWTTKVSVKGNIFDELSERQLVNFNHEVFGFYFVLCRFNIE*RWSGQCWSKR 192
           + L G + + TT+ S   N+    +  +L    H VF  +F LC F     WS  C ++ 
Sbjct: 269 NGLEGSMILVTTRSSKVANLVSNSNHYELKGLQHGVFWNFFKLCAFGSVQSWSNSCRNRP 328

Query: 193 FLQ 201
            L+
Sbjct: 329 ELE 331


>02_01_0051 - 385738-385968,386439-386864
          Length = 218

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 309 RFIQLKVYRLVQCNVA*WNLLPSPLSC 389
           RF Q+KVY+    NV   NLLP+P  C
Sbjct: 155 RFAQIKVYQTGPFNVEAANLLPTPGIC 181


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,548,877
Number of Sequences: 37544
Number of extensions: 299631
Number of successful extensions: 668
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)