Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_M06
         (942 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388...   166   2e-41
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135...    36   0.047
02_04_0462 + 23131433-23132836                                         35   0.082
02_04_0426 - 22802143-22802667,22804929-22805129                       30   3.1  
05_06_0005 + 24802843-24803101,24804086-24804333,24804417-248045...    29   4.1  
07_01_0140 + 1022878-1023057,1024461-1024579,1024952-1025237           29   7.1  
01_06_1731 + 39516897-39517632,39517744-39517912,39517985-395184...    29   7.1  

>12_01_0491 -
           3884764-3885114,3885143-3885403,3885493-3885711,
           3885792-3886019,3886378-3886480,3886703-3886815,
           3887262-3887323,3887915-3888104
          Length = 508

 Score =  166 bits (404), Expect = 2e-41
 Identities = 81/101 (80%), Positives = 88/101 (87%)
 Frame = +1

Query: 244 LHQQDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELX 423
           L +QDLSKLDVTKL  LSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNEL 
Sbjct: 34  LMKQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELE 93

Query: 424 RNITIKXGYANAKIYQCDNPKCPRPTSFISGGSSKDDSFPC 546
           RNITIK GYANAKIY+C++ KCPRP  + + GS K+DS  C
Sbjct: 94  RNITIKLGYANAKIYKCEDEKCPRPMCYKAYGSGKEDSPHC 134


>03_06_0699 -
           35612919-35612989,35613079-35613319,35613506-35613568,
           35613644-35613709,35614110-35614193,35614685-35614890,
           35614977-35615067,35615176-35615280,35615552-35615626,
           35615728-35615820,35615914-35615989,35616115-35616305
          Length = 453

 Score = 35.9 bits (79), Expect = 0.047
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = +1

Query: 325 INIGTIGHVAHGKSTVVKAISGV 393
           +N+GTIGHV HGK+T+  AI+ V
Sbjct: 68  VNVGTIGHVDHGKTTLTAAITKV 90


>02_04_0462 + 23131433-23132836
          Length = 467

 Score = 35.1 bits (77), Expect = 0.082
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = +1

Query: 325 INIGTIGHVAHGKSTVVKAISGV 393
           +NIGTIGHV HGK+T+  A++ V
Sbjct: 71  VNIGTIGHVDHGKTTLTAALTMV 93


>02_04_0426 - 22802143-22802667,22804929-22805129
          Length = 241

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +2

Query: 554 PACTARFPTSSPSELLXHCPASPPP 628
           P+C AR PTSSP  +    P SPPP
Sbjct: 33  PSCQARLPTSSP-VMPPVTPLSPPP 56


>05_06_0005 +
           24802843-24803101,24804086-24804333,24804417-24804572,
           24804956-24805114,24805862-24805929,24806044-24806433,
           24806515-24806563,24806636-24806788,24807416-24807589,
           24808207-24808362,24808705-24808756,24808830-24808988,
           24809058-24809094,24809218-24809252,24809349-24809400,
           24809614-24809663,24810590-24811924,24812688-24812825,
           24812907-24812957,24813081-24814237
          Length = 1625

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
 Frame = +1

Query: 307 ISRQATINIGTIGHVAHGKSTVVKAI-SGVQTVRFKNELXRNITIKXGYANAKIYQCDNP 483
           + + +T+ +   GH   GK  VVK +  G+  +  ++E   +     G+  A+   C+N 
Sbjct: 536 VPKSSTVTVLRTGHDGEGKQGVVKHLYMGILFIHNESESENS-----GFFCAQCSSCENV 590

Query: 484 KCPRPTSFISGGSSKDDSFP 543
           K  +  +  + G+S D+  P
Sbjct: 591 KKRKELASFTFGNSDDNPIP 610


>07_01_0140 + 1022878-1023057,1024461-1024579,1024952-1025237
          Length = 194

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +2

Query: 446 VMQMXKSTNATILNVRGQPALYPAAHLRMTAFXVFAPACTARFPTSSPSELLXHCP 613
           + +    ++A I      P+L+PAA L  TAF   A A  AR       + L H P
Sbjct: 11  ISRRLSGSSAVICQAPPLPSLHPAAQLMTTAFSSPAAAAAARVRRIPNLQGLQHPP 66


>01_06_1731 +
           39516897-39517632,39517744-39517912,39517985-39518488,
           39518619-39518747,39519849-39519990,39520082-39520453
          Length = 683

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 515 AAHLRMTAFXVFAPACTARFPTSS-PSELLXHCPASPPPXWQLL 643
           A++L       F PA  A FP    P +L  +CP  PPP +Q++
Sbjct: 16  ASNLLDAGAQAFYPAVGAPFPFQQLPHQL--YCPQPPPPPYQVM 57


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,642,074
Number of Sequences: 37544
Number of extensions: 387124
Number of successful extensions: 850
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)