Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_M05
         (923 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0065 + 12013715-12013720,12013899-12014612                       34   0.18 
12_02_0580 + 20776820-20777247,20777341-20778109,20779280-207794...    29   5.2  
10_08_0668 + 19737875-19738073,19738157-19738304,19738315-197384...    29   5.2  
06_01_0464 - 3300356-3300673,3300757-3301244,3301315-3302137           29   5.2  
05_01_0061 - 422914-423027,423114-423149,423250-423324,423412-42...    29   5.2  
01_07_0338 - 42840890-42841006,42841101-42841136,42841226-428413...    29   5.2  
02_05_0426 - 28881671-28881753,28882130-28882621,28882802-288828...    29   6.9  
01_06_1752 + 39659914-39659942,39660195-39660306,39660348-396605...    28   9.1  

>09_03_0065 + 12013715-12013720,12013899-12014612
          Length = 239

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -3

Query: 525 YWVHRHYSGTLVNSTVAXTKXYYTLAVHAQVRPRSGSSAGEEXGIA 388
           YWV+R  SG +  +     K     +V A +RP+ GS+AG+E   A
Sbjct: 129 YWVYRSGSGNVTLNVSCLKKMAARESVLAYLRPQDGSAAGDEESSA 174


>12_02_0580 +
           20776820-20777247,20777341-20778109,20779280-20779447,
           20779877-20780236
          Length = 574

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2

Query: 619 LPSAGSXRATQSWXRRWPAXAGXSRCCXWALVLGA 515
           LPSAG    T    RRW    G + C  +A+ LG+
Sbjct: 36  LPSAGDVARTTVLSRRWRHLCGIAPCLRFAVGLGS 70


>10_08_0668 +
           19737875-19738073,19738157-19738304,19738315-19738453,
           19738521-19738664,19739502-19739561,19740058-19740190,
           19740669-19740865
          Length = 339

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
 Frame = +3

Query: 96  RMTSIDYTKVTIKEKEL-----YTPPFGRSSLCIVEWFXNELQVCGSVSGR 233
           R TSI    +T+K ++L     + PP   S   ++EWF +++Q  G V  R
Sbjct: 215 RKTSITGHSLTMKYRKLCIRGYWDPPEDISKYAMIEWFKSQMQEAGIVDLR 265


>06_01_0464 - 3300356-3300673,3300757-3301244,3301315-3302137
          Length = 542

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 335 CGTKYGGPPXSTSLASPVNPGD 270
           C  ++GGPP  +S+A PV  G+
Sbjct: 200 CQVRWGGPPSKSSIADPVLTGE 221


>05_01_0061 -
           422914-423027,423114-423149,423250-423324,423412-423465,
           423554-423620,423912-424025,424114-424215,424220-424269,
           424380-424424,424559-424642,424996-425100,425300-425443,
           425535-425643,425738-425766
          Length = 375

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +2

Query: 401 SSPALEPDRGRTWA*TAR 454
           S P LEPDRG TW  T R
Sbjct: 236 SQPGLEPDRGLTWQMTKR 253


>01_07_0338 -
           42840890-42841006,42841101-42841136,42841226-42841300,
           42841380-42841433,42841703-42841769,42841844-42841900,
           42842163-42842276,42842354-42842455,42842538-42842653,
           42842892-42842975,42843429-42843533,42843732-42843875,
           42843961-42844069,42844149-42844177
          Length = 402

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +2

Query: 401 SSPALEPDRGRTWA*TAR 454
           S P LEPDRG TW  T R
Sbjct: 243 SQPGLEPDRGLTWQMTKR 260


>02_05_0426 -
           28881671-28881753,28882130-28882621,28882802-28882864,
           28883251-28883440,28883534-28883642,28883952-28884363,
           28884967-28885196,28885294-28885403
          Length = 562

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 621 PFRQQVVXEQRSPGXVVGQLXLEXAAAAXGRSYWVHRHY 505
           P   Q+V + + P  VVG      AAA+ G S+  H  Y
Sbjct: 166 PVETQLVAQSQPPSSVVGSAAAPLAAASNGSSFQNHSLY 204


>01_06_1752 +
           39659914-39659942,39660195-39660306,39660348-39660533,
           39660918-39661022,39661147-39661230,39661416-39661531,
           39661636-39661737,39661816-39661929,39662323-39662389,
           39662457-39662510,39662899-39662973,39663057-39663092,
           39663490-39663591
          Length = 393

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 401 SSPALEPDRGRTWA*TARV 457
           S P LEPD+G TW  T R+
Sbjct: 258 SQPGLEPDKGLTWQMTKRL 276


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,715,756
Number of Sequences: 37544
Number of extensions: 405500
Number of successful extensions: 814
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)