Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_M05
         (923 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR533538-1|CAG38569.1|  315|Homo sapiens PTD012 protein.              106   1e-22
AL136605-1|CAB66540.1|  315|Homo sapiens hypothetical protein pr...   106   1e-22
BC007110-1|AAH07110.2|  310|Homo sapiens C11orf54 protein protein.    101   4e-21
BC012298-1|AAH12298.1|  265|Homo sapiens chromosome 11 open read...    96   1e-19

>CR533538-1|CAG38569.1|  315|Homo sapiens PTD012 protein.
          Length = 315

 Score =  106 bits (255), Expect = 1e-22
 Identities = 71/225 (31%), Positives = 104/225 (46%), Gaps = 2/225 (0%)
 Frame = +1

Query: 160 LDEVACVLSNGLXTNFKFVEVSVADSPYLTEPPYYLKSPGLTGDAKLVXIGGPPYLVPXV 339
           L+E+A V+  GL  NF  V+VSV D P LT+ P+     G+ G  ++  +GG PYL+P V
Sbjct: 13  LEELAGVMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLV 72

Query: 340 KRDKIYDLAXLLEHLNRDPXFLAGAGAGPWXYLGVNCE--GIVXLSVRNGTVDQGTRIVS 513
            + K+YDL  + + +     F+ GAGAGP+  LG N E   ++     +     G+    
Sbjct: 73  NQKKVYDLNKIAKEIKLPGAFILGAGAGPFQTLGFNSEFMPVIQTESEHKPPVNGSYFAH 132

Query: 514 VHPVRAPXGSSGXLQXXLANDXTRTALLXNYLLTEGKPGKVLKWSGXTGRXKSXXITFIR 693
           V+P  A  G          +D  + ALL N   +EG+PGKV++            +T +R
Sbjct: 133 VNP--ADGGCLLEKYSEKCHDF-QCALLANLFASEGQPGKVIEVKAKRRTGPLNLVTCMR 189

Query: 694 ETLKXSLXRQXXGSGRXXRAAPRXXAXST*CRNFSRAPLCSDPAV 828
           ETL+     +  G G                  FS  PL SD  V
Sbjct: 190 ETLEKHYGNKPIGMGGTFIIQKGKVKSHIMPAEFSSCPLNSDEEV 234


>AL136605-1|CAB66540.1|  315|Homo sapiens hypothetical protein
           protein.
          Length = 315

 Score =  106 bits (255), Expect = 1e-22
 Identities = 71/225 (31%), Positives = 104/225 (46%), Gaps = 2/225 (0%)
 Frame = +1

Query: 160 LDEVACVLSNGLXTNFKFVEVSVADSPYLTEPPYYLKSPGLTGDAKLVXIGGPPYLVPXV 339
           L+E+A V+  GL  NF  V+VSV D P LT+ P+     G+ G  ++  +GG PYL+P V
Sbjct: 13  LEELAGVMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLV 72

Query: 340 KRDKIYDLAXLLEHLNRDPXFLAGAGAGPWXYLGVNCE--GIVXLSVRNGTVDQGTRIVS 513
            + K+YDL  + + +     F+ GAGAGP+  LG N E   ++     +     G+    
Sbjct: 73  NQKKVYDLNKIAKEIKLPGAFILGAGAGPFQTLGFNSEFMPVIQTESEHKPPVNGSYFAH 132

Query: 514 VHPVRAPXGSSGXLQXXLANDXTRTALLXNYLLTEGKPGKVLKWSGXTGRXKSXXITFIR 693
           V+P  A  G          +D  + ALL N   +EG+PGKV++            +T +R
Sbjct: 133 VNP--ADGGCLLEKYSEKCHDF-QCALLANLFASEGQPGKVIEVKAKRRTGPLNFVTCMR 189

Query: 694 ETLKXSLXRQXXGSGRXXRAAPRXXAXST*CRNFSRAPLCSDPAV 828
           ETL+     +  G G                  FS  PL SD  V
Sbjct: 190 ETLEKHYGNKPIGMGGTFIIQKGKVKSHIMPAEFSSCPLNSDEEV 234


>BC007110-1|AAH07110.2|  310|Homo sapiens C11orf54 protein protein.
          Length = 310

 Score =  101 bits (242), Expect = 4e-21
 Identities = 68/219 (31%), Positives = 99/219 (45%), Gaps = 2/219 (0%)
 Frame = +1

Query: 178 VLSNGLXTNFKFVEVSVADSPYLTEPPYYLKSPGLTGDAKLVXIGGPPYLVPXVKRDKIY 357
           V+  GL  NF  V+VSV D P LT+ P+     G+ G  ++  +GG PYL+P V + K+Y
Sbjct: 14  VMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVY 73

Query: 358 DLAXLLEHLNRDPXFLAGAGAGPWXYLGVNCE--GIVXLSVRNGTVDQGTRIVSVHPVRA 531
           DL  + + +     F+ GAGAGP+  LG N E   ++     +     G+    V+P  A
Sbjct: 74  DLNKIAKEIKLPGAFILGAGAGPFQTLGFNSEFMPVIQTESEHKPPVNGSYFAHVNP--A 131

Query: 532 PXGSSGXLQXXLANDXTRTALLXNYLLTEGKPGKVLKWSGXTGRXKSXXITFIRETLKXS 711
             G          +D  + ALL N   +EG+PGKV++            +T +RETL+  
Sbjct: 132 DGGCLLEKYSEKCHDF-QCALLANLFASEGQPGKVIEVKAKRRTGPLNFVTCMRETLEKH 190

Query: 712 LXRQXXGSGRXXRAAPRXXAXST*CRNFSRAPLCSDPAV 828
              +  G G                  FS  PL SD  V
Sbjct: 191 YGNKPIGMGGTFIIQKGKVKSHIMPAEFSSCPLNSDEEV 229


>BC012298-1|AAH12298.1|  265|Homo sapiens chromosome 11 open reading
           frame 54 protein.
          Length = 265

 Score = 96.3 bits (229), Expect = 1e-19
 Identities = 57/165 (34%), Positives = 86/165 (52%), Gaps = 2/165 (1%)
 Frame = +1

Query: 160 LDEVACVLSNGLXTNFKFVEVSVADSPYLTEPPYYLKSPGLTGDAKLVXIGGPPYLVPXV 339
           L+E+A V+  GL  NF  V+VSV D P LT+ P+     G+ G  ++  +GG PYL+P V
Sbjct: 13  LEELAGVMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLV 72

Query: 340 KRDKIYDLAXLLEHLNRDPXFLAGAGAGPWXYLGVNCE--GIVXLSVRNGTVDQGTRIVS 513
            + K+YDL  + + +     F+ GAGAGP+  LG N E   ++     +     G+    
Sbjct: 73  NQKKVYDLNKIAKEIKLPGAFILGAGAGPFQTLGFNSEFMPVIQTESEHKPPVNGSYFAH 132

Query: 514 VHPVRAPXGSSGXLQXXLANDXTRTALLXNYLLTEGKPGKVLKWS 648
           V+P  A  G          +D  + ALL N   +EG+PGK  ++S
Sbjct: 133 VNP--ADGGCLLEKYSEKCHDF-QCALLANLFASEGQPGKPAEFS 174


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,361,085
Number of Sequences: 237096
Number of extensions: 2410014
Number of successful extensions: 3520
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3509
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)