Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_M04
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0274 - 23755384-23755655,23755780-23756139,23756316-237564...    29   3.8  
07_03_1727 + 29068348-29068571,29069473-29069514,29069593-290698...    28   8.9  

>05_05_0274 -
           23755384-23755655,23755780-23756139,23756316-23756474,
           23756757-23757235,23757344-23757475,23757723-23757797,
           23757882-23757950,23758025-23758096,23758196-23758267,
           23758348-23758419,23758526-23758687,23758786-23758857,
           23758955-23759029,23759615-23759686,23759781-23759901,
           23760051-23760138
          Length = 783

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +1

Query: 7   LTTTHYREFLKI*SFCXVRVERYCIRNFEFSGTIEXR*NEXCTY--FELRLRVGAGSRRG 180
           L+  H+R  + +  FC  + E+  +  +  +GT+         Y  ++ RLR+  GS RG
Sbjct: 655 LSRVHHRNLVSLIGFCYEQGEQMLVYEYISNGTLRENLTGSGMYLDWKKRLRIALGSARG 714


>07_03_1727 +
           29068348-29068571,29069473-29069514,29069593-29069839,
           29069936-29070013,29070551-29070736,29070829-29071126,
           29071775-29072244
          Length = 514

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +1

Query: 172 RRGQRCSRAQVEALQEN*ESGTQRSRWINQSGSSYSRHRA 291
           +RG++ +RA+ EA +E    GT+R+R + +  +    HRA
Sbjct: 384 KRGEQMARAR-EAAREITPEGTERARVVGEEEAGPEHHRA 422


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,983,140
Number of Sequences: 37544
Number of extensions: 185468
Number of successful extensions: 413
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)