Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_L24
(982 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.046
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.25
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.33
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 29 1.0
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.7
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 1.7
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 28 2.3
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 3.1
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 27 3.1
SPCC11E10.07c |||translation initiation factor eIF2B alpha subun... 27 4.0
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 27 5.3
SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces po... 27 5.3
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.5 bits (73), Expect = 0.046
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +3
Query: 516 TSPTAXPPPXXFXSPPXRAPPXPXXXXSXPPXP 614
++PT PPP PP APP P S PP P
Sbjct: 1703 SAPTPPPPPMS-VPPPPSAPPMPAGPPSAPPPP 1734
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.25
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 519 SPTAXPPPXXFXSPPXRAPPXPXXXXSXPPXPP 617
+P PPP P PP P + PP PP
Sbjct: 747 APIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 551 PXPPXPRTPXPXPXPIPTP 607
P PP P P P PIP P
Sbjct: 734 PPPPAVIVPTPAPAPIPVP 752
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 4/23 (17%)
Frame = +2
Query: 551 PXPPXPR----TPXPXPXPIPTP 607
P PP P TP P P P+P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPP 754
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.33
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 498 NGXXXYTSPTAXPPPXXFXSPPXRAPPXPXXXXSXPPXPP 617
+G P A PP PP APP P PP PP
Sbjct: 1176 SGIPPVPKPAAGVPPVP---PPSEAPPVPKPSVGVPPVPP 1212
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +3
Query: 492 SPNGXXXYTSPTAXPPPXXFXSPPXRAPPXPXXXXSXPPXPP 617
+P+G P+ PP +P PP P PP PP
Sbjct: 1154 APSGAPPVPKPSVAAPPVP--APSSGIPPVPKPAAGVPPVPP 1193
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +3
Query: 492 SPNGXXXYTSPTAXPPPXXFXSPPXRAPPXPXXXXSXPPXP 614
+P+G +P+ PP P APP P + PP P
Sbjct: 1078 APSGAPPVPAPSGIPP---VPKPSVAAPPVPKPSVAVPPVP 1115
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +3
Query: 492 SPNGXXXYTSPTAXPPPXXFXSPPXRAPPXPXXXXSXPPXP 614
+P+G P+ PP P APP P + PP P
Sbjct: 1116 APSGAPPVPKPSVAAPPVPV---PSGAPPVPKPSVAAPPVP 1153
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 495 PNGXXXYTSPTAXPPPXXFXSPPXRAPPXPXXXXSXPPXP 614
P+ P+ PP PP APP P PP P
Sbjct: 1194 PSEAPPVPKPSVGVPPVP---PPSTAPPVPTPSAGLPPVP 1230
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 116 MLAASAGVV--ELSADTSNQDLEEKLYNSILTGDYXSAVRQSLEYESXXKGSII 271
++ A+AG+ LS + N+D+ K+ L G Y +A ++ KGS+I
Sbjct: 91 VMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGSLI 144
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 522 PTAXPPPXXFXSPPXRAPPXPXXXXSXPPXPP 617
P++ PPP +P P P + PP PP
Sbjct: 168 PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 164 NQDLEEKLYNSILTGDYXSAVRQSLE 241
+ DLE+ + ++LTGD SAV+ LE
Sbjct: 551 DSDLEKNITEALLTGDVLSAVKACLE 576
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 103 YNEKFHFVRSLSDRLQVCKSKILRNS 26
Y+E FH + L++ LQ C KIL S
Sbjct: 471 YSELFHKTQELNEELQSCLQKILEAS 496
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Frame = +2
Query: 521 PYRXPSPXXLPXPPX--PRTPXPXPXPIPTP 607
P P P +P P P P P P P P P
Sbjct: 454 PIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +3
Query: 519 SPTAXPPPXXFXSPPXRAPPXPXXXXSXPPXPP 617
+P + PP PP P P + PP PP
Sbjct: 419 TPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +2
Query: 518 QPYRXPS--PXXLPXPPXPRTPXPXPXPIPTPL 610
+P PS P +P P RT P P IPTP+
Sbjct: 580 EPNASPSVIPPRVPTPVPGRTLSPKPTRIPTPI 612
>SPCC11E10.07c |||translation initiation factor eIF2B alpha
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 560 PXPRTPXPXPXPIPTP 607
P P T P P PIPTP
Sbjct: 272 PSPETVHPEPEPIPTP 287
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 129 ARASLNYPRTLLTKTSRRNCTTASSPATTXVLSVRAW 239
AR SLNY ++ + SRRN ++P S + W
Sbjct: 622 ARESLNYLKSFNKQLSRRNAPDINNPIADFQNSFQNW 658
>SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 521
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -2
Query: 195 LLYSFSSRSWLEVSADSSTTPALAASMHIANTTRSFILLGAFQIAFKSA 49
++YS++S S + SA S +L + +AN SF L A I SA
Sbjct: 465 VVYSYTSSSSMPSSAIPSFNISLISQNAVANAGNSFSPLSAMVIMMMSA 513
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,976,879
Number of Sequences: 5004
Number of extensions: 29265
Number of successful extensions: 183
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 505288058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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