Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_L21
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0426 + 20667639-20667938                                         33   0.42 
06_02_0187 + 12805788-12807007,12807059-12807186,12807811-128078...    29   5.1  
11_01_0368 + 2800597-2801037,2802282-2802314,2802789-2802876,280...    29   6.8  
02_04_0127 + 19992651-19993334,19993853-19993885,19994060-199941...    29   6.8  
04_04_0524 - 25916869-25916876,25917352-25917506,25917712-259178...    28   9.0  
04_03_0892 + 20596107-20596682,20597219-20597251,20597794-205978...    28   9.0  

>06_03_0426 + 20667639-20667938
          Length = 99

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = -3

Query: 181 SRSWLEVSADSSTTPALAASMHIANTTRSFILLGAFQDRLQVCKSN 44
           SR++L  S   S + A+AAS  +   +R   LL  +QDR Q+C+SN
Sbjct: 50  SRTFLLWSLKVSRSYAMAASSAVLKVSRVVKLLRWWQDREQLCRSN 95


>06_02_0187 +
           12805788-12807007,12807059-12807186,12807811-12807859,
           12808508-12808853
          Length = 580

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
 Frame = -3

Query: 307 LSMIRLLTTFWMMEPLPWL-----SYSKL*RTALS*SPVRMLLYSFSSRSWLEVSADSST 143
           L+++ L+   W + P   L     + S      L  SP   +  SF S +    S D++T
Sbjct: 36  LALLTLIMALWQLHPYQPLVLLPAALSSSPCPLLPRSPTSGIAVSFLSTAAATNSTDTAT 95

Query: 142 TPALAASMHIANTTR 98
            P   A+  +A TTR
Sbjct: 96  VPTTTAAARVAATTR 110


>11_01_0368 +
           2800597-2801037,2802282-2802314,2802789-2802876,
           2802984-2803465,2803552-2803818,2803955-2804304,
           2804396-2804945
          Length = 736

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 747 IANSTMPWXSGTIVNPLXKTA 809
           +  +++PW +GT VNPL + A
Sbjct: 264 VTTASLPWMTGTAVNPLFRAA 284


>02_04_0127 +
           19992651-19993334,19993853-19993885,19994060-19994128,
           19994494-19994581,19994627-19995132,19995210-19995503,
           19995557-19995906,19996020-19996456,19996718-19996743,
           19996995-19997078
          Length = 856

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 747 IANSTMPWXSGTIVNPLXKTA 809
           +  +++PW +GT VNPL + A
Sbjct: 376 VTTASLPWMTGTAVNPLFRAA 396


>04_04_0524 -
           25916869-25916876,25917352-25917506,25917712-25917841,
           25918013-25918094,25918180-25918213,25918271-25918327,
           25918686-25918791,25920755-25920881
          Length = 232

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 599 LYLVLWILKYTLLFSHQGNELPTDEFSMLV 510
           L L+ +IL+Y L F  + N LP D F+ LV
Sbjct: 47  LCLLWYILRYVLGFFQRYNLLPRDSFTFLV 76


>04_03_0892 +
           20596107-20596682,20597219-20597251,20597794-20597881,
           20597966-20598447,20598545-20598811,20598881-20599230,
           20599330-20599861
          Length = 775

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 747 IANSTMPWXSGTIVNPLXKTA 809
           +  +++PW +GT +NPL + A
Sbjct: 309 VTTASLPWMTGTAINPLFRAA 329


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,939,505
Number of Sequences: 37544
Number of extensions: 435043
Number of successful extensions: 1164
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)