Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_L17
(936 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22E12.17c |glo3||ARF GTPase activating protein|Schizosacchar... 132 5e-32
SPCC622.14 |||GTPase activating protein |Schizosaccharomyces pom... 105 7e-24
SPAC824.09c |||GTPase activating protein |Schizosaccharomyces po... 76 6e-15
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 73 4e-14
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 56 7e-09
SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1||... 56 9e-09
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 27 2.9
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 6.6
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 26 6.6
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 26 8.8
>SPAC22E12.17c |glo3||ARF GTPase activating
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 486
Score = 132 bits (320), Expect = 5e-32
Identities = 63/124 (50%), Positives = 88/124 (70%), Gaps = 7/124 (5%)
Frame = +1
Query: 70 SKSDIEAVFQRLRAIPANKACFDCNAKNPTWSSVTYGVFICLDCSAVHRSLGVHLTFV-- 243
+K + + + LR+ NK CFDC AKNPTWSS T+G+++CLDCSA HR++GVH++FV
Sbjct: 4 TKEESQKLLTSLRSQRDNKVCFDCGAKNPTWSSTTFGIYLCLDCSAAHRNMGVHISFVRF 63
Query: 244 -RSTQLDTNWTWKQLRNMQLGGNINAIQFFRTHG----LVTEDARQKYSSRVAQMYRDKL 408
RST LD +WT+ QLR M++GGN NA +F+ HG L ++D R KYSS+ A+ Y +KL
Sbjct: 64 LRSTVLD-SWTYAQLRVMRVGGNENARNYFKRHGGVSLLNSKDCRLKYSSKTAKQYLEKL 122
Query: 409 NLLS 420
L+
Sbjct: 123 KSLA 126
>SPCC622.14 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 105 bits (253), Expect = 7e-24
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 2/105 (1%)
Frame = +1
Query: 100 RLRAIPANKACFDCNAKNPTWSSVTYGVFICLDCSAVHRSLGVHLTFVRSTQLDTNWTWK 279
+L +P NK CFDC+A NP W+S G+FICLDCS HR LGV +FVRS +D NW+ +
Sbjct: 7 QLTRLPENKKCFDCDAPNPQWASCNLGIFICLDCSGQHRGLGVEKSFVRSITMD-NWSER 65
Query: 280 QLRNMQLGGNINAIQFFRTHGLVTE--DARQKYSSRVAQMYRDKL 408
Q++ M++GGN NA F T + + R+KY++ +A+ R K+
Sbjct: 66 QVKMMEVGGNSNAKTFLSTDPMFSAAGSIREKYNTDIAEDLRQKI 110
>SPAC824.09c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 320
Score = 76.2 bits (179), Expect = 6e-15
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Frame = +1
Query: 55 LDSGPSKSDIEA-VFQRLRAIPANKACFDCNA-KNPTWSSVTYGVFICLDCSAVHRSLGV 228
++S K + A V + L P NK C DC + P W+S GVFIC+ CS VHRSLGV
Sbjct: 2 INSKSKKKESNALVLKSLLREPYNKVCADCKRNEQPRWASWNLGVFICIRCSGVHRSLGV 61
Query: 229 HLTFVRSTQLDTNWTWKQLRNMQLGGNINA 318
H++ V+S LD +WT +Q NM GN A
Sbjct: 62 HVSRVKSVDLD-SWTDEQTENMTRWGNERA 90
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 73.3 bits (172), Expect = 4e-14
Identities = 30/86 (34%), Positives = 53/86 (61%)
Frame = +1
Query: 88 AVFQRLRAIPANKACFDCNAKNPTWSSVTYGVFICLDCSAVHRSLGVHLTFVRSTQLDTN 267
A+ + ++++ N C DC+ + W+S G+F+CL C+ +HR LG H++ V+S LD
Sbjct: 9 AIRELVQSVSGNNLCADCSTRGVQWASWNLGIFLCLRCATIHRKLGTHVSKVKSISLD-E 67
Query: 268 WTWKQLRNMQLGGNINAIQFFRTHGL 345
W+ Q+ M+ GNINA +++ + L
Sbjct: 68 WSNDQIEKMKHWGNINANRYWNPNPL 93
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 56.0 bits (129), Expect = 7e-09
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +1
Query: 118 ANKACFDCNAK-NPTWSSVTYGVFICLDCSAVHRSLGVHLTFVRSTQLD 261
++++C DCN W ++ + V +C+DCS +HRSLG H+T +RS LD
Sbjct: 682 SDQSCADCNTTARVEWCAINFPVVLCIDCSGIHRSLGTHITKIRSLTLD 730
>SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 55.6 bits (128), Expect = 9e-09
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +1
Query: 118 ANKACFDCNA-KNPTWSSVTYGVFICLDCSAVHRSLGVHLTFVRSTQLDT 264
+N C DC + K+ TW S+ V +C++CS +HRSLG H++ RS LD+
Sbjct: 726 SNSVCADCGSVKDVTWCSINIPVVLCIECSGIHRSLGTHISKTRSLLLDS 775
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 358 ARQKYSSRVAQMYRD-KLNLLSEQAMKTHGTKLH 456
A+++ R+AQ R+ K L E+++K H KLH
Sbjct: 640 AQKEEEERIAQQKREEKRRLAYEESLKRHAKKLH 673
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 431 IACSESKLSLSRYICATRELYF*RASSVTS 342
++ S+SKLS S+Y+C+ +Y S++T+
Sbjct: 821 VSDSDSKLSCSKYMCSFTFIYSDFTSNITN 850
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 286 RNMQLGGNINAIQFF-RTHGLVTEDARQKYSSRVAQMYRDKLNLL 417
+NM+L +++ Q THG V D S Q R+K++++
Sbjct: 406 KNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMI 450
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 25.8 bits (54), Expect = 8.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 237 LRSFDSTGH*LDMETAEKHATWREHKCYTILPHPRAGD 350
+R+F T H + M+ +H+ + HK TIL R D
Sbjct: 16 MRAFYETRHIIFMDAILRHSAYVLHKIRTILTFGRLTD 53
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,250,996
Number of Sequences: 5004
Number of extensions: 61704
Number of successful extensions: 162
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 475330268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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