Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_L17
         (936 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23486-3|AAL38955.1|  529|Caenorhabditis elegans Hypothetical pr...   204   5e-53
Z75711-5|CAB00036.1|  423|Caenorhabditis elegans Hypothetical pr...   105   6e-23
Z93785-1|CAB07858.1|  495|Caenorhabditis elegans Hypothetical pr...    84   1e-16
AL031633-14|CAA21032.1|  903|Caenorhabditis elegans Hypothetical...    71   9e-13
AL031633-13|CAA21027.1|  951|Caenorhabditis elegans Hypothetical...    71   9e-13
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical...    71   9e-13
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam...    71   9e-13
AJ132700-1|CAA10736.1|  952|Caenorhabditis elegans centaurin gam...    71   9e-13
AL023828-18|CAA19462.2|  742|Caenorhabditis elegans Hypothetical...    69   4e-12
AL023828-17|CAA19463.2|  826|Caenorhabditis elegans Hypothetical...    69   4e-12
AJ132699-1|CAA10735.1|  742|Caenorhabditis elegans centaurin bet...    69   4e-12
AJ132698-1|CAA10734.1|  826|Caenorhabditis elegans centaurin bet...    69   4e-12
Z49937-1|CAA90184.2|  670|Caenorhabditis elegans Hypothetical pr...    41   0.001
AF039047-10|AAB94229.2|  400|Caenorhabditis elegans Hypothetical...    30   2.7  
U55369-10|AAK52180.2|  389|Caenorhabditis elegans Hypothetical p...    29   4.8  
U23449-5|AAC24296.2|  365|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>U23486-3|AAL38955.1|  529|Caenorhabditis elegans Hypothetical
           protein F07F6.4 protein.
          Length = 529

 Score =  204 bits (499), Expect = 5e-53
 Identities = 88/134 (65%), Positives = 109/134 (81%)
 Frame = +1

Query: 58  DSGPSKSDIEAVFQRLRAIPANKACFDCNAKNPTWSSVTYGVFICLDCSAVHRSLGVHLT 237
           ++GPSK D++   +++RA+P NK CFDC A+NPTW +VTYGVF+C+DCSAVHR+LGVHLT
Sbjct: 4   ENGPSKVDLQTAMRKMRALPPNKLCFDCGARNPTWCTVTYGVFLCIDCSAVHRNLGVHLT 63

Query: 238 FVRSTQLDTNWTWKQLRNMQLGGNINAIQFFRTHGLVTEDARQKYSSRVAQMYRDKLNLL 417
           FVRST LDTNWTW QLR MQLGGN NA QFF+ HG  T +A+QKY SR AQMYRDKL+ L
Sbjct: 64  FVRSTNLDTNWTWLQLRAMQLGGNGNANQFFKAHGCNTTEAQQKYKSRAAQMYRDKLSTL 123

Query: 418 SEQAMKTHGTKLHI 459
            ++A +  GT+L I
Sbjct: 124 CQEAQRKFGTQLII 137


>Z75711-5|CAB00036.1|  423|Caenorhabditis elegans Hypothetical
           protein K02B12.7 protein.
          Length = 423

 Score =  105 bits (251), Expect = 6e-23
 Identities = 49/108 (45%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
 Frame = +1

Query: 91  VFQRLRAIPANKACFDCNAKNPTWSSVTYGVFICLDCSAVHRSLGVHLTFVRSTQLDTNW 270
           V + LR    N  CF+C A NP W SV+YG++ICL+CS +HRSLGVHL+FVRS  +D  W
Sbjct: 9   VLKELRPCDDNNFCFECEANNPQWVSVSYGIWICLECSGIHRSLGVHLSFVRSVTMD-KW 67

Query: 271 TWKQLRNMQLGGNINAIQFFRTHGLVTE--DARQKYSSRVAQMYRDKL 408
              +L  M+ GGN    +F ++     E    ++KY+SR A ++RDK+
Sbjct: 68  KDIELAKMKAGGNRKFAEFLQSQPDYKEKWTIQEKYNSRAAALFRDKV 115


>Z93785-1|CAB07858.1|  495|Caenorhabditis elegans Hypothetical
           protein W09D10.1 protein.
          Length = 495

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 40/95 (42%), Positives = 58/95 (61%)
 Frame = +1

Query: 121 NKACFDCNAKNPTWSSVTYGVFICLDCSAVHRSLGVHLTFVRSTQLDTNWTWKQLRNMQL 300
           NK C DC AK P W++   GVFIC+ C+ +HR+LGVH++ VRS  LD +WT +Q++ M++
Sbjct: 29  NKYCADCQAKTPRWAAWNLGVFICIRCAGIHRNLGVHISKVRSVNLD-SWTPEQVQTMRV 87

Query: 301 GGNINAIQFFRTHGLVTEDARQKYSSRVAQMYRDK 405
            GN  A Q +  H L  +  R     ++ Q  R K
Sbjct: 88  MGNEKARQVYE-HDLPAQFRRPTNDQQMEQFIRSK 121


>AL031633-14|CAA21032.1|  903|Caenorhabditis elegans Hypothetical
           protein Y39A1A.15c protein.
          Length = 903

 Score = 71.3 bits (167), Expect = 9e-13
 Identities = 31/72 (43%), Positives = 44/72 (61%)
 Frame = +1

Query: 103 LRAIPANKACFDCNAKNPTWSSVTYGVFICLDCSAVHRSLGVHLTFVRSTQLDTNWTWKQ 282
           LR+IP N  C DC   +  W+S+  G+ IC++CS +HR+LG H++ VR  +LD  W  + 
Sbjct: 624 LRSIPGNGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELD-QWPVEH 682

Query: 283 LRNMQLGGNINA 318
           L  MQ  GN  A
Sbjct: 683 LAVMQAIGNDKA 694


>AL031633-13|CAA21027.1|  951|Caenorhabditis elegans Hypothetical
           protein Y39A1A.15b protein.
          Length = 951

 Score = 71.3 bits (167), Expect = 9e-13
 Identities = 31/72 (43%), Positives = 44/72 (61%)
 Frame = +1

Query: 103 LRAIPANKACFDCNAKNPTWSSVTYGVFICLDCSAVHRSLGVHLTFVRSTQLDTNWTWKQ 282
           LR+IP N  C DC   +  W+S+  G+ IC++CS +HR+LG H++ VR  +LD  W  + 
Sbjct: 672 LRSIPGNGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELD-QWPVEH 730

Query: 283 LRNMQLGGNINA 318
           L  MQ  GN  A
Sbjct: 731 LAVMQAIGNDKA 742


>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
            protein Y39A1A.15a protein.
          Length = 1107

 Score = 71.3 bits (167), Expect = 9e-13
 Identities = 31/72 (43%), Positives = 44/72 (61%)
 Frame = +1

Query: 103  LRAIPANKACFDCNAKNPTWSSVTYGVFICLDCSAVHRSLGVHLTFVRSTQLDTNWTWKQ 282
            LR+IP N  C DC   +  W+S+  G+ IC++CS +HR+LG H++ VR  +LD  W  + 
Sbjct: 828  LRSIPGNGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELD-QWPVEH 886

Query: 283  LRNMQLGGNINA 318
            L  MQ  GN  A
Sbjct: 887  LAVMQAIGNDKA 898


>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma 1B
            protein.
          Length = 1107

 Score = 71.3 bits (167), Expect = 9e-13
 Identities = 31/72 (43%), Positives = 44/72 (61%)
 Frame = +1

Query: 103  LRAIPANKACFDCNAKNPTWSSVTYGVFICLDCSAVHRSLGVHLTFVRSTQLDTNWTWKQ 282
            LR+IP N  C DC   +  W+S+  G+ IC++CS +HR+LG H++ VR  +LD  W  + 
Sbjct: 828  LRSIPGNGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELD-QWPVEH 886

Query: 283  LRNMQLGGNINA 318
            L  MQ  GN  A
Sbjct: 887  LAVMQAIGNDKA 898


>AJ132700-1|CAA10736.1|  952|Caenorhabditis elegans centaurin gamma
           1A protein.
          Length = 952

 Score = 71.3 bits (167), Expect = 9e-13
 Identities = 31/72 (43%), Positives = 44/72 (61%)
 Frame = +1

Query: 103 LRAIPANKACFDCNAKNPTWSSVTYGVFICLDCSAVHRSLGVHLTFVRSTQLDTNWTWKQ 282
           LR+IP N  C DC   +  W+S+  G+ IC++CS +HR+LG H++ VR  +LD  W  + 
Sbjct: 673 LRSIPGNGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELD-QWPVEH 731

Query: 283 LRNMQLGGNINA 318
           L  MQ  GN  A
Sbjct: 732 LAVMQAIGNDKA 743


>AL023828-18|CAA19462.2|  742|Caenorhabditis elegans Hypothetical
           protein Y17G7B.15b protein.
          Length = 742

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = +1

Query: 76  SDIEAVFQRLRAIPANKACFDCNAKNPTWSSVTYGVFICLDCSAVHRSLGVHLTFVRSTQ 255
           S     F+++R +P N+ C DC +  P W S+  GV +C++CS  HRSLGV  + VRS  
Sbjct: 360 SSSTTAFEQVRRVPGNEVCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVRSLC 419

Query: 256 LDTNWTWKQLRNMQLG-GNINAIQFFRTH 339
           +D+     +LR++ L  GN    + F  H
Sbjct: 420 MDS--IDNELRDVLLALGNRQVNEIFLAH 446


>AL023828-17|CAA19463.2|  826|Caenorhabditis elegans Hypothetical
           protein Y17G7B.15a protein.
          Length = 826

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = +1

Query: 76  SDIEAVFQRLRAIPANKACFDCNAKNPTWSSVTYGVFICLDCSAVHRSLGVHLTFVRSTQ 255
           S     F+++R +P N+ C DC +  P W S+  GV +C++CS  HRSLGV  + VRS  
Sbjct: 444 SSSTTAFEQVRRVPGNEVCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVRSLC 503

Query: 256 LDTNWTWKQLRNMQLG-GNINAIQFFRTH 339
           +D+     +LR++ L  GN    + F  H
Sbjct: 504 MDS--IDNELRDVLLALGNRQVNEIFLAH 530


>AJ132699-1|CAA10735.1|  742|Caenorhabditis elegans centaurin beta
           1B protein.
          Length = 742

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = +1

Query: 76  SDIEAVFQRLRAIPANKACFDCNAKNPTWSSVTYGVFICLDCSAVHRSLGVHLTFVRSTQ 255
           S     F+++R +P N+ C DC +  P W S+  GV +C++CS  HRSLGV  + VRS  
Sbjct: 360 SSSTTAFEQVRRVPGNEVCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVRSLC 419

Query: 256 LDTNWTWKQLRNMQLG-GNINAIQFFRTH 339
           +D+     +LR++ L  GN    + F  H
Sbjct: 420 MDS--IDNELRDVLLALGNRQVNEIFLAH 446


>AJ132698-1|CAA10734.1|  826|Caenorhabditis elegans centaurin beta
           1A protein.
          Length = 826

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = +1

Query: 76  SDIEAVFQRLRAIPANKACFDCNAKNPTWSSVTYGVFICLDCSAVHRSLGVHLTFVRSTQ 255
           S     F+++R +P N+ C DC +  P W S+  GV +C++CS  HRSLGV  + VRS  
Sbjct: 444 SSSTTAFEQVRRVPGNEVCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVRSLC 503

Query: 256 LDTNWTWKQLRNMQLG-GNINAIQFFRTH 339
           +D+     +LR++ L  GN    + F  H
Sbjct: 504 MDS--IDNELRDVLLALGNRQVNEIFLAH 530


>Z49937-1|CAA90184.2|  670|Caenorhabditis elegans Hypothetical
           protein F14F3.2 protein.
          Length = 670

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +1

Query: 124 KACFDCNAKNPTWSSVTYGVFICLDCSAVHRSLGVHLTFVRSTQLDTNWTWKQLR 288
           K C DC  K   W+SV  G  IC +C   H  LG  ++++R  +  + W  + +R
Sbjct: 16  KECDDCGKKEVEWASVKKGTVICSECFCFHSYLGPSVSYLRHLR-KSAWDEEHIR 69


>AF039047-10|AAB94229.2|  400|Caenorhabditis elegans Hypothetical
           protein K11D12.9 protein.
          Length = 400

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
 Frame = -2

Query: 419 ESKLSLSRYICATRELYF*RASS---VTSPWVRKNCIAFMFPPSCMFLSCFHVQLVSS*V 249
           ESKLS+ R +    E    R      +    V + CI     PS +F+ C H+   S   
Sbjct: 318 ESKLSMERRVEEVEEQLRSRNRDFQRLQEKLVAECCICLATKPSIVFMPCRHLITCSGCY 377

Query: 248 ERTKVRWTPKLRCTAEQS 195
           + +  R  P  R T E S
Sbjct: 378 DASDFRECPTCRSTIENS 395


>U55369-10|AAK52180.2|  389|Caenorhabditis elegans Hypothetical
           protein C18C4.9 protein.
          Length = 389

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +3

Query: 162 VICDVRCIHMSRLLGGAPK--LGSPSHLRSFDST 257
           V C  R    S L  G P+  LGSP + RS DST
Sbjct: 91  VFCSTRTSKQSPLATGCPRQNLGSPGNRRSVDST 124


>U23449-5|AAC24296.2|  365|Caenorhabditis elegans Hypothetical
           protein K06A1.1 protein.
          Length = 365

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +3

Query: 513 FHNTESXQXLTQTSLQMPPXPINRSP*VQ--KLVYGTLVQRWDRTLTPLXRQPSXAXNLL 686
           FH+ E    LT+TSL + P  + R   ++  + V G L +      TPL   P    N+L
Sbjct: 255 FHSREIGIYLTKTSLAIDPDVVKRRTALEMSRKVVGELAELLSCDRTPL--TPYFPRNML 312

Query: 687 PNXP 698
           P  P
Sbjct: 313 PIDP 316


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,223,729
Number of Sequences: 27780
Number of extensions: 362931
Number of successful extensions: 927
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)