Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_L15
         (904 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024777-1|AAF60563.1|  133|Caenorhabditis elegans Hypothetical ...    31   1.5  
U39742-3|AAY86225.1|  188|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>AC024777-1|AAF60563.1|  133|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.2 protein.
          Length = 133

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +1

Query: 751 ILASCSCAVLVLFDTQLIIEKRRM--GSKDFVQHALELFIDFIGMFKKLV 894
           +L +  C   +  D QLI+  RR+    ++++  A  +F+D +GMF  ++
Sbjct: 78  VLGALLCMFYLAIDIQLIMGGRRVEISPEEYIFAATHVFVDILGMFLNIL 127


>U39742-3|AAY86225.1|  188|Caenorhabditis elegans Hypothetical
           protein C25F6.8 protein.
          Length = 188

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -1

Query: 574 SYYDRWVNYTDIFKPGDPCSC 512
           ++ DR+VN TD+F+P +  SC
Sbjct: 92  TFCDRYVNKTDVFEPHNTWSC 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,403,951
Number of Sequences: 27780
Number of extensions: 439862
Number of successful extensions: 1094
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)