Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_L10
         (907 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC16A3.12c |||triglyceride lipase-cholesterol esterase |Schizo...   113   4e-26
SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos...   108   9e-25
SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos...    94   2e-20
SPBC25H2.03 |||vacuolar protein involved in phosphoinositide met...    31   0.23 
SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc...    29   0.91 
SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po...    29   0.91 
SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces p...    29   1.2  
SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual     28   1.6  
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc...    26   6.4  
SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large...    26   8.5  

>SPBC16A3.12c |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 443

 Score =  113 bits (271), Expect = 4e-26
 Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 3/149 (2%)
 Frame = +1

Query: 355 GYRCETHSLISQ-GYVLNIHRIPQARSGGDTPSNTVILQHGLFASSADWV-LNGPGKSLA 528
           GYR E H + +Q  ++L +HRI   +         V   HGL  +S  WV +N   +SL 
Sbjct: 83  GYRVEEHLVRTQDNFILCLHRITHPKQS-QHKREVVYCHHGLMTNSELWVAVNESERSLP 141

Query: 529 FVLADAGYDVWMPNIRGNRYSREHTTLKSSSTQYWNFSWHEVAQHDIPXIIDYI-RGXGR 705
           FVL ++GYDVW+ N RGN+YSR+H T K    ++WNFS  ++A  DIP  +DYI R  GR
Sbjct: 142 FVLIESGYDVWLGNNRGNKYSRKHITYKPKDEEFWNFSLDDMAMFDIPDTVDYILRETGR 201

Query: 706 AXNTXIAYMGHSMGSTMLFAMLALRPEXN 792
                + Y+G S G+    A L++ P+ N
Sbjct: 202 ---EKLNYIGFSQGTAQAMAALSINPDLN 227


>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 467

 Score =  108 bits (260), Expect = 9e-25
 Identities = 61/153 (39%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
 Frame = +1

Query: 355 GYRCETHSLISQG-YVLNIHRIPQ---ARSGGDTPSN--TVILQHGLFASSADWVLN-GP 513
           GY  E H + ++  Y+L IHRI +    R G   P     V   HGL  +S  WV N  P
Sbjct: 89  GYYVEDHLVRTEDDYILCIHRISKDSPGRIGSPHPKKLPVVYCHHGLLMNSEVWVCNVDP 148

Query: 514 GKSLAFVLADAGYDVWMPNIRGNRYSREHTTLKSSSTQYWNFSWHEVAQHDIPXIIDYIR 693
              L F L + GYDVW+ N RGN+YSR+H    S+  ++W+FS  + AQ+DIP  IDYI 
Sbjct: 149 RNCLVFDLVNKGYDVWLGNNRGNKYSRQHLRFDSTDKEFWDFSIDDFAQYDIPDTIDYI- 207

Query: 694 GXGRAXNTXIAYMGHSMGSTMLFAMLALRPEXN 792
               +  T + Y+G S G+   FA L++ P  N
Sbjct: 208 -LKTSGQTKLTYIGFSQGTAQAFASLSIHPLLN 239


>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score = 94.3 bits (224), Expect = 2e-20
 Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 5/149 (3%)
 Frame = +1

Query: 355 GYRCETHSL-ISQGYVLNIHRIPQARSGGDTPSN---TVILQHGLFASSADWVLNGPGK- 519
           GY  E H +  + GY+L +HR+ + + G     N    V+  HGL  +S  WV N   + 
Sbjct: 83  GYDLEEHFVRTTDGYLLGLHRVYKKKKGKIEELNYLPPVLFIHGLMMNSESWVCNLKKED 142

Query: 520 SLAFVLADAGYDVWMPNIRGNRYSREHTTLKSSSTQYWNFSWHEVAQHDIPXIIDYIRGX 699
           ++ F L + GYDVW+ N+RGN+YS ++    S + ++W+FS   +A  DIP I+ YI   
Sbjct: 143 AIPFALVEQGYDVWLGNLRGNKYSIKNIKFSSQNPKFWDFSLDSIAIFDIPSIVKYILSV 202

Query: 700 GRAXNTXIAYMGHSMGSTMLFAMLALRPE 786
               +  I+ +G S G+ + FA L++  E
Sbjct: 203 NSFDS--ISLVGFSQGAILAFAALSIDTE 229


>SPBC25H2.03 |||vacuolar protein involved in phosphoinositide
           metabolism|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 811

 Score = 31.1 bits (67), Expect = 0.23
 Identities = 13/50 (26%), Positives = 30/50 (60%)
 Frame = +1

Query: 157 RSLVNNFEDARNYIETQKDKVIEEWSSYMEDIKLSSSWTNFLEDKENPSL 306
           +SL+  F + R ++ ++ + +I +  +Y+E  ++ +S+   LE +EN  L
Sbjct: 518 KSLLQMFAEDRKFLNSRGNLIIRQLCNYIEGERVYTSFAGILETEENLEL 567


>SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein
           Ubr1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1958

 Score = 29.1 bits (62), Expect = 0.91
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 559 WMPNIRGNRYSREHTTLKSSSTQYWNFSWHE 651
           W+  +R   + R  TTL+  +  Y N S+HE
Sbjct: 750 WLSQMRAKLWIRNGTTLRDQAHHYRNLSFHE 780


>SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 412

 Score = 29.1 bits (62), Expect = 0.91
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 145 FGSSRSLVNNFEDARNYIETQKDKVIEEWS 234
           FG +    NNF+    YIE+Q D V+EE S
Sbjct: 122 FGEAIDNENNFDIILQYIESQYDNVLEEES 151


>SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 669

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 11/21 (52%), Positives = 18/21 (85%)
 Frame = +1

Query: 721 IAYMGHSMGSTMLFAMLALRP 783
           I  +GHS+GST++F +L+L+P
Sbjct: 394 IFIIGHSLGSTVVFDILSLQP 414


>SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1029

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 201 FDVVTSVFEVIDEASRASEQIKPL 130
           FDV   +FE+ID  + AS++I P+
Sbjct: 664 FDVYAELFEIIDGCTFASKEISPI 687


>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
           4|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 636

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
 Frame = +1

Query: 184 ARNYIETQKDKVIEEWSSYMEDIKLSSSWTNFLEDKENPSLEDPDVVLSVPAMITRRGYR 363
           A N  + +++++ +E +     + L  SW N    ++    +DP     V A    +  R
Sbjct: 296 AGNSKKREEERIAKEAADAQHQLSLVQSWINGYGQEKLADKKDP---AKVSASFVEKYGR 352

Query: 364 C-ETHSLISQGYVLNIHRIPQARSGGDT 444
           C E     + G V   H++    SG +T
Sbjct: 353 CQEVIGRGAFGVVRIAHKVDPQNSGSET 380


>SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large
            subunit Rpc1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1405

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +1

Query: 187  RNYIETQKDKVIEEWSSYMEDIKLSSSWTNFLEDKENPSLED 312
            R++IET +  VIE  + Y+  ++        LE+ +   L+D
Sbjct: 958  RDFIETIRTFVIENIAKYLASVRERRDLAPMLEEPDMDDLDD 999


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,995,074
Number of Sequences: 5004
Number of extensions: 58184
Number of successful extensions: 170
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)