Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_L08
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.27
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.27
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.27
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 1.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 1.9
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 5.7
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 5.7
AF016446-13|AAC24172.1| 349|Caenorhabditis elegans Seven tm rec... 28 7.6
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +1
Query: 691 PPPPGKXXXVFWGPFPXPXXKXPXXPXXXXGXXGXPPPXGGXPXSPXXGXXPXXXXXXXP 870
PPPP K G P P PPP G P P G P P
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 871 P 873
P
Sbjct: 299 P 299
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +1
Query: 691 PPPPGKXXXVFWGPFPXPXXKXPXXPXXXXGXXGXPPPXGGXPXSPXXGXXPXXXXXXXP 870
PPPP K G P P PPP G P P G P P
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 871 P 873
P
Sbjct: 320 P 320
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +1
Query: 691 PPPPGKXXXVFWGPFPXPXXKXPXXPXXXXGXXGXPPPXGGXPXSPXXGXXPXXXXXXXP 870
PPPP K G P P PPP G P P G P P
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 871 P 873
P
Sbjct: 305 P 305
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 691 PPPPGKXXXVFWGPFPXPXXKXPXXPXXXXGXXGXPPPXGG-XPXSP 828
PPPPG + GP P P P G PPP GG P P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGG--LPPISGGPPPPPPPPGGCPPPPP 773
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = +1
Query: 691 PPPPGKXXXVFWGPFPXPXXKX----PXXPXXXXGXXGXPPP 804
PPPPG + GP P P P P G G PPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +1
Query: 691 PPPPGKXXXVFWGPFPXPXXKXPXXPXXXXGXXGXPPPXGGXPXSPXXGXXPXXXXXXXP 870
PPPP + GP P P P G PPP G P S P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGG--LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 871 P 873
P
Sbjct: 771 P 771
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 691 PPPPGKXXXVFWGPFPXPXXKXPXXPXXXXGXXGXPPPXGG-XPXSP 828
PPPPG + GP P P P G PPP GG P P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGG--LPPISGGPPPPPPPPGGCPPPPP 773
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = +1
Query: 691 PPPPGKXXXVFWGPFPXPXXKX----PXXPXXXXGXXGXPPP 804
PPPPG + GP P P P P G G PPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +1
Query: 691 PPPPGKXXXVFWGPFPXPXXKXPXXPXXXXGXXGXPPPXGGXPXSPXXGXXPXXXXXXXP 870
PPPP + GP P P P G PPP G P S P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGG--LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 871 P 873
P
Sbjct: 771 P 771
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 691 PPPPGKXXXVFWGPFPXPXXKXPXXPXXXXGXXGXPPPXGG-XPXSP 828
PPPPG + GP P P P G PPP GG P P
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGG--LPPISGGPPPPPPPPGGCPPPPP 356
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = +1
Query: 691 PPPPGKXXXVFWGPFPXPXXKX----PXXPXXXXGXXGXPPP 804
PPPPG + GP P P P P G G PPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +1
Query: 691 PPPPGKXXXVFWGPFPXPXXKXPXXPXXXXGXXGXPPPXGGXPXSPXXGXXPXXXXXXXP 870
PPPP + GP P P P G PPP G P S P P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGG--LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 871 P 873
P
Sbjct: 354 P 354
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 691 PPPPGKXXXVFWGPFPXPXXKXPXXPXXXXGXXGXPPP 804
PPPP + G +P P P P G PPP
Sbjct: 349 PPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/69 (28%), Positives = 20/69 (28%), Gaps = 7/69 (10%)
Frame = +1
Query: 688 TPPPPGKXXXVFWGPFPXPXXKXPXXPXXXXGXXGXPPP-------XGGXPXSPXXGXXP 846
TP PP W P P P P G PPP GG P P G
Sbjct: 284 TPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY 343
Query: 847 XXXXXXXPP 873
PP
Sbjct: 344 PGGMPPPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 691 PPPPGKXXXVFWGPFPXPXXKXPXXPXXXXGXXGXPPP 804
PPPP + G +P P P P G PPP
Sbjct: 359 PPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/69 (28%), Positives = 20/69 (28%), Gaps = 7/69 (10%)
Frame = +1
Query: 688 TPPPPGKXXXVFWGPFPXPXXKXPXXPXXXXGXXGXPPP-------XGGXPXSPXXGXXP 846
TP PP W P P P P G PPP GG P P G
Sbjct: 294 TPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY 353
Query: 847 XXXXXXXPP 873
PP
Sbjct: 354 PGGMPPPPP 362
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -3
Query: 872 GGXXXKXFXGXXPXLGEXGXPPXGGGXPXXPXXXXGXXGXXXXGXGK 732
GG G P G G PP G G P P G G G+
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLPKSHGR 227
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -3
Query: 872 GGXXXKXFXGXXPXLGEXGXPPXGGGXPXXPXXXXGXXGXXXXGXGK 732
GG G P G G PP G G P P G G G+
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLPKSHGR 507
>AF016446-13|AAC24172.1| 349|Caenorhabditis elegans Seven tm
receptor protein 211 protein.
Length = 349
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -3
Query: 326 NIINVVTFCGI-I*ALSLSESFCFCQ--GVDCWSRADDGVSNPLTHF 195
N+I +F GI + ++S++ S F G+ CW R D S+ THF
Sbjct: 197 NVIYWPSFIGIMLDSMSINISLMFSAYFGIKCWLRMDAIFSSSSTHF 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,217,418
Number of Sequences: 27780
Number of extensions: 221925
Number of successful extensions: 645
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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