Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_L06
         (969 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0062 - 476027-476044,476791-477195,477287-477574,477653-47...    31   1.8  
03_06_0684 + 35531167-35532899,35533360-35533596,35533870-355340...    29   4.2  
01_05_0383 + 21667798-21668079                                         29   5.6  

>11_01_0062 -
           476027-476044,476791-477195,477287-477574,477653-477830,
           478005-478133,478531-478729,478832-478970,479130-479195,
           480459-480580,480672-480742,480819-480903,481335-481453,
           481577-481687,481945-482117,482375-482446,482768-482862,
           483361-483450,483550-483646
          Length = 818

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +1

Query: 226 VISNAEKSDGKIYTIHA--DINDNRIEKGVYEVDLNLNTTVKILDKGRDLCYDDD 384
           +IS A+  D  +Y I+   +++D+   +G       L      +D G D+CYDDD
Sbjct: 245 IISLAQSEDSDVYDIYTVKEVDDDTTMEGTSSAPYPLLQ----VDNGDDVCYDDD 295


>03_06_0684 +
           35531167-35532899,35533360-35533596,35533870-35534032,
           35534112-35534174
          Length = 731

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -1

Query: 150 FGSCDA*SHHKDEKGCCVHLGHPVSFSENVQQTSKS*GIPIVVSR 16
           F SC +   HK E G  VH    +     +Q T+K    P+V  R
Sbjct: 681 FSSCKSSGAHKGEYGAIVHCMKNIPSENQIQATAKEVQNPLVSGR 725


>01_05_0383 + 21667798-21668079
          Length = 93

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 673 GXXXPXWQXGTWGXDGE 623
           G   P WQ GTWG  GE
Sbjct: 21  GLHDPTWQQGTWGHSGE 37


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,203,081
Number of Sequences: 37544
Number of extensions: 275117
Number of successful extensions: 637
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2811537600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)