Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_K21
         (984 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   3.2  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   4.2  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    23   5.6  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    23   5.6  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    23   5.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   7.4  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = -2

Query: 485 PXPPPPXXXXAPPXAXGLXPPXXGXPPRPP 396
           P PP P     P    G   P     PRPP
Sbjct: 109 PRPPHPRLRREPEAEPGNNRPVYIPQPRPP 138



 Score = 23.4 bits (48), Expect = 3.2
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = -2

Query: 485 PXPPPPXXXXAPPXAXGLXPPXXGXPPRPP 396
           P PP P     P    G   P     PRPP
Sbjct: 135 PRPPHPRLRREPEAEPGNNRPVYIPQPRPP 164


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -3

Query: 409 PPAPPPXPPXPXPLXP 362
           PP P P PP P    P
Sbjct: 338 PPKPAPPPPPPSSSGP 353


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -2

Query: 479 PPPPXXXXAPPXAXGLXPP 423
           PP P     PP A  L PP
Sbjct: 158 PPTPFPRFIPPNAYRLRPP 176


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -2

Query: 479 PPPPXXXXAPPXAXGLXPP 423
           PP P     PP A  L PP
Sbjct: 158 PPTPFPRFIPPNAYRLRPP 176


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -2

Query: 479 PPPPXXXXAPPXAXGLXPP 423
           PP P     PP A  L PP
Sbjct: 386 PPTPFPRFIPPNAYRLRPP 404


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 11/41 (26%), Positives = 14/41 (34%)
 Frame = -3

Query: 484 PXXPPRXXGXPPPAXXAXFPPXXAXPPAPPPXPPXPXPLXP 362
           P   P+      P   +  PP    P APP   P    + P
Sbjct: 27  PHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISP 67


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,305
Number of Sequences: 438
Number of extensions: 5115
Number of successful extensions: 48
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32532591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)