Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_K18
(930 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 317 3e-86
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 317 3e-86
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 317 3e-86
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 317 3e-86
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 317 3e-86
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 317 3e-86
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 317 3e-86
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 317 3e-86
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 317 3e-86
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 316 6e-86
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 316 6e-86
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 316 7e-86
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 316 1e-85
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 315 1e-85
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 211 2e-54
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 208 2e-53
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 174 4e-43
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 167 7e-41
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 93 1e-18
AK074268-1|BAB85034.1| 274|Homo sapiens protein ( Homo sapiens ... 33 1.5
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 317 bits (779), Expect = 3e-86
Identities = 158/180 (87%), Positives = 167/180 (92%)
Frame = +2
Query: 71 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 250
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 251 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 430
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 431 YGVLRFIMESGARGCEVVVSGKLRGXRAKSMKFVXGLMIHSGDPCHDYVNTATRHVLLXQ 610
YGVLRFIMESGA+GCEVVVSGKLRG RAKSMKFV GLMIHSGDP + YV+TA RHVLL Q
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Score = 33.9 bits (74), Expect = 0.85
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 628 KVQIMLPWDXQGQNGPXEAXTRPHPGYXTPKDD--PXAPRAXXRSG 759
KV+IMLPWD G+ GP + H PKD+ P P + + G
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLP-DHVSIVEPKDEILPTTPISEQKGG 229
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 317 bits (779), Expect = 3e-86
Identities = 158/180 (87%), Positives = 167/180 (92%)
Frame = +2
Query: 71 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 250
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 251 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 430
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 431 YGVLRFIMESGARGCEVVVSGKLRGXRAKSMKFVXGLMIHSGDPCHDYVNTATRHVLLXQ 610
YGVLRFIMESGA+GCEVVVSGKLRG RAKSMKFV GLMIHSGDP + YV+TA RHVLL Q
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Score = 33.9 bits (74), Expect = 0.85
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 628 KVQIMLPWDXQGQNGPXEAXTRPHPGYXTPKDD--PXAPRAXXRSG 759
KV+IMLPWD G+ GP + H PKD+ P P + + G
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLP-DHVSIVEPKDEILPTTPISEQKGG 229
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 317 bits (779), Expect = 3e-86
Identities = 158/180 (87%), Positives = 167/180 (92%)
Frame = +2
Query: 71 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 250
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 251 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 430
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 431 YGVLRFIMESGARGCEVVVSGKLRGXRAKSMKFVXGLMIHSGDPCHDYVNTATRHVLLXQ 610
YGVLRFIMESGA+GCEVVVSGKLRG RAKSMKFV GLMIHSGDP + YV+TA RHVLL Q
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Score = 33.9 bits (74), Expect = 0.85
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 628 KVQIMLPWDXQGQNGPXEAXTRPHPGYXTPKDD--PXAPRAXXRSG 759
KV+IMLPWD G+ GP + H PKD+ P P + + G
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLP-DHVSIVEPKDEILPTTPISEQKGG 229
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 317 bits (779), Expect = 3e-86
Identities = 158/180 (87%), Positives = 167/180 (92%)
Frame = +2
Query: 71 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 250
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 251 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 430
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 431 YGVLRFIMESGARGCEVVVSGKLRGXRAKSMKFVXGLMIHSGDPCHDYVNTATRHVLLXQ 610
YGVLRFIMESGA+GCEVVVSGKLRG RAKSMKFV GLMIHSGDP + YV+TA RHVLL Q
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Score = 33.9 bits (74), Expect = 0.85
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 628 KVQIMLPWDXQGQNGPXEAXTRPHPGYXTPKDD--PXAPRAXXRSG 759
KV+IMLPWD G+ GP + H PKD+ P P + + G
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLP-DHVSIVEPKDEILPTTPISEQKGG 229
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 317 bits (779), Expect = 3e-86
Identities = 158/180 (87%), Positives = 167/180 (92%)
Frame = +2
Query: 71 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 250
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 251 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 430
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 431 YGVLRFIMESGARGCEVVVSGKLRGXRAKSMKFVXGLMIHSGDPCHDYVNTATRHVLLXQ 610
YGVLRFIMESGA+GCEVVVSGKLRG RAKSMKFV GLMIHSGDP + YV+TA RHVLL Q
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Score = 33.9 bits (74), Expect = 0.85
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 628 KVQIMLPWDXQGQNGPXEAXTRPHPGYXTPKDD--PXAPRAXXRSG 759
KV+IMLPWD G+ GP + H PKD+ P P + + G
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLP-DHVSIVEPKDEILPTTPISEQKGG 229
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 317 bits (779), Expect = 3e-86
Identities = 158/180 (87%), Positives = 167/180 (92%)
Frame = +2
Query: 71 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 250
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 251 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 430
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 431 YGVLRFIMESGARGCEVVVSGKLRGXRAKSMKFVXGLMIHSGDPCHDYVNTATRHVLLXQ 610
YGVLRFIMESGA+GCEVVVSGKLRG RAKSMKFV GLMIHSGDP + YV+TA RHVLL Q
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Score = 33.9 bits (74), Expect = 0.85
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 628 KVQIMLPWDXQGQNGPXEAXTRPHPGYXTPKDD--PXAPRAXXRSG 759
KV+IMLPWD G+ GP + H PKD+ P P + + G
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLP-DHVSIVEPKDEILPTTPISEQKGG 229
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 317 bits (779), Expect = 3e-86
Identities = 158/180 (87%), Positives = 167/180 (92%)
Frame = +2
Query: 71 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 250
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 251 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 430
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 431 YGVLRFIMESGARGCEVVVSGKLRGXRAKSMKFVXGLMIHSGDPCHDYVNTATRHVLLXQ 610
YGVLRFIMESGA+GCEVVVSGKLRG RAKSMKFV GLMIHSGDP + YV+TA RHVLL Q
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Score = 33.9 bits (74), Expect = 0.85
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 628 KVQIMLPWDXQGQNGPXEAXTRPHPGYXTPKDD--PXAPRAXXRSG 759
KV+IMLPWD G+ GP + H PKD+ P P + + G
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLP-DHVSIVEPKDEILPTTPISEQKGG 229
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 317 bits (779), Expect = 3e-86
Identities = 158/180 (87%), Positives = 167/180 (92%)
Frame = +2
Query: 71 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 250
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 251 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 430
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 431 YGVLRFIMESGARGCEVVVSGKLRGXRAKSMKFVXGLMIHSGDPCHDYVNTATRHVLLXQ 610
YGVLRFIMESGA+GCEVVVSGKLRG RAKSMKFV GLMIHSGDP + YV+TA RHVLL Q
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Score = 33.9 bits (74), Expect = 0.85
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 628 KVQIMLPWDXQGQNGPXEAXTRPHPGYXTPKDD--PXAPRAXXRSG 759
KV+IMLPWD G+ GP + H PKD+ P P + + G
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLP-DHVSIVEPKDEILPTTPISEQKGG 229
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 317 bits (779), Expect = 3e-86
Identities = 158/180 (87%), Positives = 167/180 (92%)
Frame = +2
Query: 71 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 250
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 251 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 430
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 431 YGVLRFIMESGARGCEVVVSGKLRGXRAKSMKFVXGLMIHSGDPCHDYVNTATRHVLLXQ 610
YGVLRFIMESGA+GCEVVVSGKLRG RAKSMKFV GLMIHSGDP + YV+TA RHVLL Q
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Score = 33.9 bits (74), Expect = 0.85
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 628 KVQIMLPWDXQGQNGPXEAXTRPHPGYXTPKDD--PXAPRAXXRSG 759
KV+IMLPWD G+ GP + H PKD+ P P + + G
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLP-DHVSIVEPKDEILPTTPISEQKGG 229
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 316 bits (777), Expect = 6e-86
Identities = 155/175 (88%), Positives = 164/175 (93%)
Frame = +2
Query: 86 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 265
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 266 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 445
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 446 FIMESGARGCEVVVSGKLRGXRAKSMKFVXGLMIHSGDPCHDYVNTATRHVLLXQ 610
FIMESGA+GCEVVVSGKLRG RAKSMKFV GLMIHSGDP + YV+TA RHVLL Q
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 178
Score = 33.9 bits (74), Expect = 0.85
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 628 KVQIMLPWDXQGQNGPXEAXTRPHPGYXTPKDD--PXAPRAXXRSG 759
KV+IMLPWD G+ GP + H PKD+ P P + + G
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLP-DHVSIVEPKDEILPTTPISEQKGG 228
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 316 bits (777), Expect = 6e-86
Identities = 155/175 (88%), Positives = 164/175 (93%)
Frame = +2
Query: 86 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 265
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 266 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 445
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 446 FIMESGARGCEVVVSGKLRGXRAKSMKFVXGLMIHSGDPCHDYVNTATRHVLLXQ 610
FIMESGA+GCEVVVSGKLRG RAKSMKFV GLMIHSGDP + YV+TA RHVLL Q
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 178
Score = 33.9 bits (74), Expect = 0.85
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 628 KVQIMLPWDXQGQNGPXEAXTRPHPGYXTPKDD--PXAPRAXXRSG 759
KV+IMLPWD G+ GP + H PKD+ P P + + G
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLP-DHVSIVEPKDEILPTTPISEQKGG 228
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 316 bits (776), Expect = 7e-86
Identities = 157/180 (87%), Positives = 167/180 (92%)
Frame = +2
Query: 71 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 250
MAV ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 251 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 430
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 431 YGVLRFIMESGARGCEVVVSGKLRGXRAKSMKFVXGLMIHSGDPCHDYVNTATRHVLLXQ 610
YGVLRFIMESGA+GCEVVVSGKLRG RAKSMKFV GLMIHSGDP + YV+TA RHVLL Q
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Score = 33.9 bits (74), Expect = 0.85
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 628 KVQIMLPWDXQGQNGPXEAXTRPHPGYXTPKDD--PXAPRAXXRSG 759
KV+IMLPWD G+ GP + H PKD+ P P + + G
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLP-DHVSIVEPKDEILPTTPISEQKGG 229
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 316 bits (775), Expect = 1e-85
Identities = 157/180 (87%), Positives = 167/180 (92%)
Frame = +2
Query: 71 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 250
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 251 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 430
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 431 YGVLRFIMESGARGCEVVVSGKLRGXRAKSMKFVXGLMIHSGDPCHDYVNTATRHVLLXQ 610
YGVLRFIMESGA+GCEVVVSGKLRG RAKSMKFV GLMIHSGDP + YV+TA RHVLL Q
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Score = 33.9 bits (74), Expect = 0.85
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 628 KVQIMLPWDXQGQNGPXEAXTRPHPGYXTPKDD--PXAPRAXXRSG 759
KV+IMLPWD G+ GP + H PKD+ P P + + G
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLP-DHVSIVEPKDEILPTTPISEQKGG 229
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 315 bits (774), Expect = 1e-85
Identities = 157/180 (87%), Positives = 166/180 (92%)
Frame = +2
Query: 71 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 250
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 251 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 430
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRAC 119
Query: 431 YGVLRFIMESGARGCEVVVSGKLRGXRAKSMKFVXGLMIHSGDPCHDYVNTATRHVLLXQ 610
YGVLRFIMESGA+GCEVVVSGKLRG RAKSMKFV GLMIHSGDP + YV+TA RHVLL Q
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Score = 33.9 bits (74), Expect = 0.85
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 628 KVQIMLPWDXQGQNGPXEAXTRPHPGYXTPKDD--PXAPRAXXRSG 759
KV+IMLPWD G+ GP + H PKD+ P P + + G
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLP-DHVSIVEPKDEILPTTPISEQKGG 229
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 211 bits (516), Expect = 2e-54
Identities = 103/118 (87%), Positives = 109/118 (92%)
Frame = +2
Query: 257 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 436
+GRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 437 VLRFIMESGARGCEVVVSGKLRGXRAKSMKFVXGLMIHSGDPCHDYVNTATRHVLLXQ 610
VLRFIMESGA+GCEVVVSGKLRG RAKSMKFV GLMIHSGDP + YV+TA RHVLL Q
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 123
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 208 bits (509), Expect = 2e-53
Identities = 105/118 (88%), Positives = 111/118 (94%)
Frame = +2
Query: 71 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 250
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 251 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 424
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 174 bits (423), Expect = 4e-43
Identities = 84/94 (89%), Positives = 88/94 (93%)
Frame = +2
Query: 329 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGX 508
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 509 RAKSMKFVXGLMIHSGDPCHDYVNTATRHVLLXQ 610
RAKSMKFV GLMIHSGDP + YV+TA RHVLL Q
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 94
Score = 33.9 bits (74), Expect = 0.85
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 628 KVQIMLPWDXQGQNGPXEAXTRPHPGYXTPKDD--PXAPRAXXRSG 759
KV+IMLPWD G+ GP + H PKD+ P P + + G
Sbjct: 100 KVKIMLPWDPTGKIGPKKPLP-DHVSIVEPKDEILPTTPISEQKGG 144
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 167 bits (405), Expect = 7e-41
Identities = 84/96 (87%), Positives = 89/96 (92%)
Frame = +2
Query: 71 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 250
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 251 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRG 358
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRG
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 93.1 bits (221), Expect = 1e-18
Identities = 44/53 (83%), Positives = 47/53 (88%)
Frame = +2
Query: 452 MESGARGCEVVVSGKLRGXRAKSMKFVXGLMIHSGDPCHDYVNTATRHVLLXQ 610
MESGA+GCEVVVSGKLRG RAKSMKFV GLMIHSGDP + YV+TA RHVLL Q
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 53
Score = 33.9 bits (74), Expect = 0.85
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 628 KVQIMLPWDXQGQNGPXEAXTRPHPGYXTPKDD--PXAPRAXXRSG 759
KV+IMLPWD G+ GP + H PKD+ P P + + G
Sbjct: 59 KVKIMLPWDPTGKIGPKKPLP-DHVSIVEPKDEILPTTPISEQKGG 103
>AK074268-1|BAB85034.1| 274|Homo sapiens protein ( Homo sapiens
cDNA FLJ23688 fis, clone HEP10127. ).
Length = 274
Score = 33.1 bits (72), Expect = 1.5
Identities = 19/55 (34%), Positives = 22/55 (40%)
Frame = +3
Query: 645 AVGPXRPERPXRSXNQTTSWXPDPQGRPXGPSSRXXKWAPXRPXASGRTPVAACP 809
A P P R S + S P P RP P+S P A PVA+CP
Sbjct: 210 AASPCCPRRHRASRCRPRSRCPLPPSRPRSPASPAHSPTPTSALALPHLPVASCP 264
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,016,587
Number of Sequences: 237096
Number of extensions: 2657325
Number of successful extensions: 9858
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9857
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12158972418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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