Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_K12
         (975 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    24   2.4  
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    24   2.4  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    24   2.4  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    24   2.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   7.3  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 17  PHYREFLKI*IVGTAAADLPLLRV 88
           P +R+F+K  I GT+ AD  +L V
Sbjct: 93  PGHRDFIKNMITGTSQADCAVLIV 116


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
          1-alpha protein.
          Length = 172

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 17 PHYREFLKI*IVGTAAADLPLLRV 88
          P +R+F+K  I GT+ AD  +L V
Sbjct: 20 PGHRDFIKNMITGTSQADCAVLIV 43


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 17  PHYREFLKI*IVGTAAADLPLLRV 88
           P +R+F+K  I GT+ AD  +L V
Sbjct: 36  PGHRDFIKNMITGTSQADCAVLIV 59


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 17  PHYREFLKI*IVGTAAADLPLLRV 88
           P +R+F+K  I GT+ AD  +L V
Sbjct: 93  PGHRDFIKNMITGTSQADCAVLIV 116


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 9/46 (19%), Positives = 21/46 (45%)
 Frame = +1

Query: 187 IALFVTIISCNKQVNNNNCIHFMXXVQGEVWEVFSALMNRPTRGER 324
           +  + +I+    QVN   C ++     GE++ +++     P  G +
Sbjct: 24  LIFYGSIMFSMTQVNKEECDYYQNLNLGEIYYIYNPRYPLPYSGSK 69


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,285
Number of Sequences: 438
Number of extensions: 2343
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32169774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)