Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_K10
(894 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0066 - 537729-538163 134 9e-32
10_07_0174 + 13815478-13815903 134 1e-31
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.71
03_02_0943 + 12598616-12598789,12599790-12601250 31 0.94
05_07_0236 - 28582157-28582552,28582639-28582911,28583324-285835... 30 2.2
02_04_0449 + 23010099-23010317,23010873-23010934,23011399-230114... 30 2.2
06_01_0889 - 6807449-6809257 30 2.9
12_02_1174 - 26696869-26698191 29 3.8
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 29 3.8
02_05_0686 - 30900748-30902167,30903442-30904742 29 3.8
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 29 5.0
08_02_0193 - 14073103-14073246,14073332-14073481,14073571-140736... 28 8.7
>03_01_0066 - 537729-538163
Length = 144
Score = 134 bits (324), Expect = 9e-32
Identities = 64/106 (60%), Positives = 85/106 (80%)
Frame = +3
Query: 147 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 326
IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF+THLMRR++ VRGIS+KLQEE
Sbjct: 17 IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFSTHLMRRIQRGPVRGISLKLQEE 76
Query: 327 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 464
ERERR ++VP+ SALE D I VD +T DML L ++ G+ + QP
Sbjct: 77 ERERRMDFVPDRSALEVDDIRVDKETLDMLTSLGMADLPGV-VRQP 121
>10_07_0174 + 13815478-13815903
Length = 141
Score = 134 bits (323), Expect = 1e-31
Identities = 62/105 (59%), Positives = 83/105 (79%)
Frame = +3
Query: 147 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 326
IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR++ VRGIS+KLQEE
Sbjct: 17 IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEE 76
Query: 327 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQ 461
ERERR ++VPE SALE + I VD +T +ML L ++ G++ Q
Sbjct: 77 ERERRMDFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQ 121
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.9 bits (69), Expect = 0.71
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 791 PAXXXPPPPXXXAXXXFGPPXPXPPXLXPXXP 886
P PPPP F PP P PP P P
Sbjct: 545 PPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLP 576
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 791 PAXXXPPPPXXXAXXXFGPPXPXPPXLXPXXP 886
P+ PPPP A GP P PP L P P
Sbjct: 709 PSAPPPPPPPPPANRSNGPSAPAPP-LPPPLP 739
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +2
Query: 791 PAXXXPPPPXXXAXXXFGPPXPXPPXLXP 877
P PPPP PP P PP + P
Sbjct: 585 PPPPPPPPPLPNCLVPSPPPPPPPPPILP 613
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 8/38 (21%)
Frame = +2
Query: 788 FPAXXXPPPPXXX--------AXXXFGPPXPXPPXLXP 877
FPA PPPP A GPP P PP L P
Sbjct: 662 FPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPP 699
>03_02_0943 + 12598616-12598789,12599790-12601250
Length = 544
Score = 31.5 bits (68), Expect = 0.94
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +3
Query: 249 AGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 428
A +++HL+RR+ + K Q EE ++ + + + LEHD+I + +T D+LK L+
Sbjct: 41 AAWSSHLIRRMFAPP----NPKEQSEESKQPVDIKEQAAQLEHDLIIKEKETLDVLKELE 96
>05_07_0236 -
28582157-28582552,28582639-28582911,28583324-28583560,
28583653-28583694,28583782-28583964,28584393-28584524,
28585605-28586057
Length = 571
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 791 PAXXXPPPPXXXAXXXFGPPXPXPPXLXPXXP 886
PA PPP PP P PP L P P
Sbjct: 93 PAPTMPPPSSGSGHTLPSPPPPLPPLLPPPQP 124
>02_04_0449 +
23010099-23010317,23010873-23010934,23011399-23011450,
23011803-23011917,23012024-23012118,23012852-23012958,
23013042-23013156,23014159-23014203,23014324-23014392
Length = 292
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -3
Query: 499 NYAXHHSHPWVA---GCVSCXPLILLKSSIFNISLVSGSTSMMSCSRADT 359
N+ HS W GC + +K+ +F+I LVS S+++C A T
Sbjct: 133 NWLKSHSASWTVADFGCGNAAVSKNVKNKVFSIDLVSEDPSVIACDMAHT 182
>06_01_0889 - 6807449-6809257
Length = 602
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 279 LRHSQVRGI-SIKLQEEERERRDNYVPEVSALEHDIIEVDPD 401
LRH Q R I ++ + R R + YVP+ HD+ E D +
Sbjct: 487 LRHPQAREIYAMAVDMVSRIRAEGYVPDTGEALHDVAEEDKE 528
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 3.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 805 PPPPPGXXXXXFWAPPP 855
PPPPP +W PPP
Sbjct: 301 PPPPPQQPSQRYWTPPP 317
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -1
Query: 885 GXXGXXXGGXGXGGPKXXXAXXXGGGGXXXAGK 787
G G GG G GGP GGGG G+
Sbjct: 54 GRGGGYGGGGGGGGPPYYGGGGGGGGGGGGQGR 86
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 791 PAXXXPPPPXXXAXXXFGPPXPXPPXLXPXXP 886
PA PPPP A PP P PP P P
Sbjct: 311 PAPPPPPPPKPAAA---APPPPPPPKAAPPPP 339
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 805 PPPPPGXXXXXFWAPPPXSPXXXXXXPGXS 894
PPPPPG W PP PG S
Sbjct: 424 PPPPPGSYAPVPWGQPPPYASYPPPPPGSS 453
>08_02_0193 -
14073103-14073246,14073332-14073481,14073571-14073640,
14073900-14074021,14074260-14074395,14074492-14074967
Length = 365
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 805 PPPPPGXXXXXFWAPPPXSP 864
PPPPP W PPP P
Sbjct: 52 PPPPPLCRRRRSWPPPPPPP 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,186,275
Number of Sequences: 37544
Number of extensions: 403686
Number of successful extensions: 2180
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1866
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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