Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_K07
         (884 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical pr...   349   1e-96
Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical pr...   311   4e-85
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical pr...    29   5.8  
U40417-9|AAA81417.2|  120|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AF043704-3|AAK21473.2|  823|Caenorhabditis elegans Sulfate perme...    29   5.8  

>Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical
           protein F59B8.2 protein.
          Length = 412

 Score =  349 bits (859), Expect = 1e-96
 Identities = 163/214 (76%), Positives = 183/214 (85%), Gaps = 1/214 (0%)
 Frame = +2

Query: 194 DEMTRIIWDLIKEKLIIPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCAT 373
           DEMTRIIWDLIKEKLI+P++D+ +H +DLG+E+RD TDDQVTID A A  KYNV +KCAT
Sbjct: 17  DEMTRIIWDLIKEKLILPYVDLNVHFFDLGIEHRDATDDQVTIDAANATLKYNVAVKCAT 76

Query: 374 ITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDKPIIIGRHAH 553
           ITPDE RVEEFKLKKMWKSPNGTIRNILGGTVFRE II KN+PRLV  W KPIIIGRHAH
Sbjct: 77  ITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIIVKNVPRLVNTWSKPIIIGRHAH 136

Query: 554 ADQYKATDFVVPGAGTLEIIFKPESG-EAIKHVVHEYKGAGVALAMFNTDASIIDFAHSS 730
           ADQYKATDFVVPGAG LEI F    G + I+  V ++KG GV+L+M+NTD SI DFAH+S
Sbjct: 137 ADQYKATDFVVPGAGKLEIKFVSADGTQTIQETVFDFKGPGVSLSMYNTDDSIRDFAHAS 196

Query: 731 FKFALDRKXPLYLSTKNTILKKYDGRFKDIFQDI 832
           FK+AL RK PLYLSTKNTILKKYDGRFKDIF +I
Sbjct: 197 FKYALQRKFPLYLSTKNTILKKYDGRFKDIFAEI 230


>Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical
           protein C34F6.8 protein.
          Length = 435

 Score =  311 bits (764), Expect = 4e-85
 Identities = 144/214 (67%), Positives = 171/214 (79%), Gaps = 1/214 (0%)
 Frame = +2

Query: 194 DEMTRIIWDLIKEKLIIPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCAT 373
           DEMTRIIW  IK KLI+P+LD+++  YDLG+E RD+T+DQVTID A AI +++VGIKCAT
Sbjct: 39  DEMTRIIWKEIKNKLILPYLDLDIKYYDLGLEYRDETNDQVTIDAAHAILEHSVGIKCAT 98

Query: 374 ITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDKPIIIGRHAH 553
           ITPDE R++EF LKKMW SPNGTIRNILGGTVFRE I+CKNIPRLV GW +PI IGRHA 
Sbjct: 99  ITPDEARIKEFNLKKMWLSPNGTIRNILGGTVFREPILCKNIPRLVPGWTQPITIGRHAF 158

Query: 554 ADQYKATDFVVPGAGTLEIIFKPESGEAIKHVVHEY-KGAGVALAMFNTDASIIDFAHSS 730
            DQYK TD V+P   TL+++     G    H V+++ K  GV LAM+NTD SI  FAHS 
Sbjct: 159 GDQYKCTDLVIPSGSTLQLLVNKPDGSKDVHNVYDFKKSGGVGLAMYNTDESIKGFAHSC 218

Query: 731 FKFALDRKXPLYLSTKNTILKKYDGRFKDIFQDI 832
           F++AL ++ PLYLSTKNTILKKYDGRFKDIFQDI
Sbjct: 219 FQYALMKQWPLYLSTKNTILKKYDGRFKDIFQDI 252


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = +2

Query: 245  PFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKKMW 424
            P +D    V ++    R +   +  +      KK+    +  T+ PDE+ VE  KL K  
Sbjct: 2175 PDVDDSEDVEEIMRRPRKRIGPKEEVVLLSVTKKHPHSYRTKTV-PDEEPVEIVKLVKNR 2233

Query: 425  KSPNGTIRNI 454
            + PN T+R +
Sbjct: 2234 RLPNATLREV 2243


>Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical
           protein T26H8.4 protein.
          Length = 561

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = -2

Query: 403 FFNSLLIRSYGRTFDAHIVFLYGLSTINCNLIISLITIFH 284
           F+NSL I S   TF    +F+   STI+ + +I LI IFH
Sbjct: 59  FYNSLSISS---TFP--FIFMTEFSTISTSFLILLIAIFH 93


>U40417-9|AAA81417.2|  120|Caenorhabditis elegans Hypothetical
           protein T08A9.13 protein.
          Length = 120

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = +2

Query: 284 MENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKK 418
           ++   + + +  ++C +A+ +Y+V  K  T+T  E++  E   KK
Sbjct: 44  LQKAKELEQRTRVECQQALDQYDVLKKIPTLTEQERKENETLTKK 88


>AF043704-3|AAK21473.2|  823|Caenorhabditis elegans Sulfate permease
           family protein 6 protein.
          Length = 823

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = +2

Query: 554 ADQYKATDFVVPGAGTLEIIFKPESGE-AIKHVVHEYKGAGVALAMFNTDASIIDFAHSS 730
           ADQY+    ++    T  II+    G+ A+K V ++YK  G+++   NT+  +     +S
Sbjct: 650 ADQYERLTHIIIDCST--IIYVDLMGQGALKDVYNDYKTIGISVLFANTNEHVRQNFETS 707

Query: 731 FKFALDRKXPLYLSTKNTI 787
             F    +  +++S  + +
Sbjct: 708 QFFEEVPRGRMFVSVSDAV 726


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,594,902
Number of Sequences: 27780
Number of extensions: 428024
Number of successful extensions: 1063
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)