Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_K06
         (1383 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542...    30   3.7  
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012...    29   8.6  
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776     29   8.6  

>03_02_0071 +
           5425722-5427154,5427259-5427464,5428445-5428686,
           5428788-5429570
          Length = 887

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 13/41 (31%), Positives = 15/41 (36%)
 Frame = +3

Query: 678 PXPLXXXXXXXXPXPPXXPAPTRXPPSXSLXXXPPXLXPXP 800
           P P+        P PP  P P   PP  +    PP   P P
Sbjct: 340 PRPVQPSNAPPPPPPPPPPPPPPPPPKLNTAPKPPPPPPPP 380


>09_04_0081 -
           14400293-14400397,14400953-14401036,14401144-14401214,
           14401293-14401380,14401487-14401678,14401772-14402704
          Length = 490

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +3

Query: 714 PXPPXXPAPTRXPPSXSLXXXPPXLXPXP 800
           P PP  PAP   PP  +    P  L P P
Sbjct: 239 PPPPHHPAPRPPPPMAAAPRQPAALPPVP 267


>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
          Length = 429

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = +3

Query: 678 PXPLXXXXXXXXPXPPXXPAPTRXPPSXSLXXXPPXLXP 794
           P P+        P PP    P R  P+ SL   PP   P
Sbjct: 269 PLPVPGVICRPPPSPPYFAPPPRATPTVSLAGPPPGFNP 307


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,805,836
Number of Sequences: 37544
Number of extensions: 107801
Number of successful extensions: 1346
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4350790500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)