Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_K05
(920 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 58 2e-09
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 56 9e-09
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 49 8e-07
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 45 2e-05
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 38 0.002
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 31 0.30
SPBC1348.05 |||membrane transporter|Schizosaccharomyces pombe|ch... 30 0.40
SPBPB2B2.16c |||MFS family membrane transporter |Schizosaccharom... 30 0.40
SPAC750.02c |||membrane transporter|Schizosaccharomyces pombe|ch... 30 0.40
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 57.6 bits (133), Expect = 2e-09
Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 2/146 (1%)
Frame = +1
Query: 238 GKW--KANGEVIKSYSPANGKVIAEVQXXXXXXXXXXXXXXXXXXXXXXELPAPARGEVV 411
GKW A+G+ +P + +A V R ++
Sbjct: 30 GKWVTAASGKTFDVENPGLNETLAPVTDMSVEETRKAIKVAHEAFLSYRNSDIKERYAIL 89
Query: 412 RQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEYIHVCDLALGLSRTLPGTVFPSERP 591
R+ D + EN L +++LE GK L +A GEV+ D G + + G S P
Sbjct: 90 RRWYDLIMENADDLATMMTLENGKALGDAKGEVVYAAKFIDWFAGEALRISGDSSMSSNP 149
Query: 592 GHVLIEKWNPLGVVGIITAFNFPVAV 669
+ +I P+GVVGIIT +NFP A+
Sbjct: 150 QNRIITIKQPVGVVGIITPWNFPAAM 175
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 55.6 bits (128), Expect = 9e-09
Identities = 35/154 (22%), Positives = 72/154 (46%), Gaps = 2/154 (1%)
Frame = +1
Query: 223 VGVF-NGKWKANGEVIKSYSPANGKVIAEVQXXXXXXXXXXXXXXXXXXXXXXELPAPAR 399
+G++ NG+W + E ++ P+ +VIA+V ++P +
Sbjct: 21 IGLYINGEWHKSAETWETVDPSIEEVIAKVYLAGEKEIDYAVKSAKEAFKTWKKVPGSEK 80
Query: 400 GEVVRQIGDALRENLQPLGKLVSLEMGK-ILPEAIGEVIEYIHVCDLALGLSRTLPGTVF 576
GE++ ++ + ++ L + +++ GK ++ A G+V I + G + + G V
Sbjct: 81 GELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIYGQVI 140
Query: 577 PSERPGHVLIEKWNPLGVVGIITAFNFPVAVFGW 678
P+ P + K P+GV G I +N+P+ + GW
Sbjct: 141 PTG-PEKLAYAKRTPIGVCGQIVPWNYPLNMAGW 173
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 49.2 bits (112), Expect = 8e-07
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +1
Query: 385 PAPARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEYIHVCDLALGLSRTLP 564
P RG V+R+I +RE + L + ++ GK P A+ ++ + + ++ T
Sbjct: 82 PGKQRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALFDIDSCADMFEYYAEVAETDN 141
Query: 565 GTV-FP-SERPGHVLIEKWNPLGVVGIITAFNFPVAVFGW 678
TV P PG EK P GV+G+IT +NFP+ + W
Sbjct: 142 PTVKVPLPNNPGFCAFEKRFPRGVIGVITPWNFPLKMALW 181
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 44.8 bits (101), Expect = 2e-05
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 5/169 (2%)
Frame = +1
Query: 178 PKYSFLKDLGLKENNVGVF-NGKW--KANGEVIKSYSPANGKVIAEVQXXXXXXXXXXXX 348
P++ + G +++ F GKW N + + +PA G++I +V
Sbjct: 3 PQFKRPELFGFDKSHAQSFVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAIS 62
Query: 349 XXXXXXXXXXELPAPARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEYI-H 525
R +++ + + + EN L K+++LE GK L +A EV +
Sbjct: 63 AANEAFKTYKNFTHVQRSQLLERWAELIMENKDDLVKMLTLENGKPLSQAEMEVTTCSGY 122
Query: 526 VCDLALGLSRTLPGTVFPSE-RPGHVLIEKWNPLGVVGIITAFNFPVAV 669
+ A RT G V PS + + LI P+GV +IT +NFP A+
Sbjct: 123 LKWYAAEAVRTF-GDVAPSSLQSQNFLISIKQPVGVSALITPWNFPAAM 170
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 38.3 bits (85), Expect = 0.002
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 3/167 (1%)
Frame = +1
Query: 187 SFLKDLGLKENNVGVFNGKWKANGEVIKSYSPANGKVIAEV---QXXXXXXXXXXXXXXX 357
++++ +GL NN V + +G +K YSP+ K+I EV
Sbjct: 18 TYIQPVGLFINNQHVDS----VHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAF 73
Query: 358 XXXXXXXELPAPARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEYIHVCDL 537
+ + RG + ++ D + +NL+ L + +L+ GK + A G+V
Sbjct: 74 QTDAPWRKFSSAQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLARGDVQAAADCFRY 133
Query: 538 ALGLSRTLPGTVFPSERPGHVLIEKWNPLGVVGIITAFNFPVAVFGW 678
G + G ++ + P+GV G I +NFP + W
Sbjct: 134 YGGWADKDYGQTIETDIK-RFAYTRHEPIGVCGQIIPWNFPFLMCAW 179
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 30.7 bits (66), Expect = 0.30
Identities = 25/137 (18%), Positives = 54/137 (39%), Gaps = 7/137 (5%)
Frame = +1
Query: 274 YSPANGKVIAEVQXXXXXXXXXXXXXXXXXXXXXXELPAPARGEVVRQIGDALRENLQPL 453
Y P +G ++ EV+ R ++ + + + N
Sbjct: 8 YCPGDGSLLGEVKLFNKSDIDQSIILAEEAQKEWKSTSFAERRNFLKALKENIIRNQDKY 67
Query: 454 GKLVSLEMGKILPEA-IGEVIEYIHVCDLALGLSRTLPGTVFPSERPGHVLIE------K 612
++ + GK L +A GE++ + + L ++ P++RP +L K
Sbjct: 68 AEIACKDTGKTLVDAAFGEILVTLEKINWTLANGEQ---SLRPTKRPNSLLTSYKGGYVK 124
Query: 613 WNPLGVVGIITAFNFPV 663
+ PLGV+ + ++N+P+
Sbjct: 125 YEPLGVIAALVSWNYPL 141
>SPBC1348.05 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 30.3 bits (65), Expect = 0.40
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 619 PLGVVGIITAFNFPVAVFGWNSRYR 693
P+G +GI T F + +FGW +RY+
Sbjct: 356 PMGFIGI-TLFEIGILLFGWTARYK 379
>SPBPB2B2.16c |||MFS family membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 30.3 bits (65), Expect = 0.40
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 619 PLGVVGIITAFNFPVAVFGWNSRYR 693
P+G +GI T F + +FGW +RY+
Sbjct: 356 PMGFIGI-TLFEIGILLFGWTARYK 379
>SPAC750.02c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 30.3 bits (65), Expect = 0.40
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 619 PLGVVGIITAFNFPVAVFGWNSRYR 693
P+G +GI T F + +FGW +RY+
Sbjct: 356 PMGFIGI-TLFEIGILLFGWTARYK 379
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,519,840
Number of Sequences: 5004
Number of extensions: 71576
Number of successful extensions: 160
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 468512460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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