Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_K05
         (920 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    24   2.2  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    24   2.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   3.0  
AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced prot...    22   6.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.8  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    22   9.0  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   9.0  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 382 VPPTHATLPVPHWR 341
           VPP ++ L  PHWR
Sbjct: 34  VPPEYSDLVRPHWR 47


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 382 VPPTHATLPVPHWR 341
           VPP ++ L  PHWR
Sbjct: 34  VPPEYSDLVHPHWR 47


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +3

Query: 105 SCVIASLY*STNGSQRINSFPHRGPEVLVFEGFRFKRKQC 224
           SCVIAS + +   ++  N  P R   +   +  R +R +C
Sbjct: 222 SCVIASRHRNLEATESENVRPRRNVLIERAKSIRARRTEC 261


>AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 30

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 623 SGFHFSIRTCPG 588
           SGFH+ + +C G
Sbjct: 17  SGFHYGVHSCEG 28


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 623 SGFHFSIRTCPG 588
           SGFH+ + +C G
Sbjct: 75  SGFHYGVHSCEG 86


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 608 SIRTCPGRSDGNTVPGSVRDRPKAK 534
           SIR   G   G++ PG+ R+   AK
Sbjct: 382 SIRNRSGLVSGSSTPGTGREHDPAK 406


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 677 HPKTATGKLKAVMMPTTPSGFHFSI 603
           H  T     +A + P TP  F+FS+
Sbjct: 288 HTSTPNFLSEAKIFPPTPGSFNFSM 312


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,637
Number of Sequences: 438
Number of extensions: 4971
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)