Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_K01
(926 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 40 0.003
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 40 0.003
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 40 0.003
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.38
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 32 0.51
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.51
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 32 0.51
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.67
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.67
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 0.88
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.5
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.0
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 2.0
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 4.7
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 6.2
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 6.2
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 6.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 6.2
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 39.9 bits (89), Expect = 0.003
Identities = 25/81 (30%), Positives = 27/81 (33%)
Frame = +1
Query: 421 GVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXVXPPPFXXKXPWGXVP 600
G PP P G G+PP PP G P P PPP P G P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP-----PAGGSP 289
Query: 601 PXKXSXXXPPGKXXGGRXPXG 663
P + PP G P G
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTG 310
Score = 35.1 bits (77), Expect = 0.072
Identities = 30/100 (30%), Positives = 33/100 (33%), Gaps = 3/100 (3%)
Frame = +1
Query: 340 GKIXPPPXXKAPGGPXXKFLFXRXWGGGVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPP 519
GK PP P P K G G PP P PP G PP
Sbjct: 227 GKRQAPPAGSPPPPPPPKGS-PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG--SPPPP 283
Query: 520 XXGGFXPXPXX-VXPPPFXXK--XPWGXVPPXKXSXXXPP 630
GG P P PPP + P G +PP + PP
Sbjct: 284 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Score = 30.3 bits (65), Expect = 2.0
Identities = 29/108 (26%), Positives = 34/108 (31%)
Frame = +1
Query: 340 GKIXPPPXXKAPGGPXXKFLFXRXWGGGVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPP 519
G PPP P P GG PP + + P G+PP G L PP
Sbjct: 270 GSPPPPPTGSPPPPP----------AGGSPPPPRAGSPPPPPPPRGSPPT--GSL---PP 314
Query: 520 XXGGFXPXPXXVXPPPFXXKXPWGXVPPXKXSXXXPPGKXXGGRXPXG 663
G P P PP + + P G GR P G
Sbjct: 315 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRG 362
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 39.9 bits (89), Expect = 0.003
Identities = 25/81 (30%), Positives = 27/81 (33%)
Frame = +1
Query: 421 GVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXVXPPPFXXKXPWGXVP 600
G PP P G G+PP PP G P P PPP P G P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP-----PAGGSP 310
Query: 601 PXKXSXXXPPGKXXGGRXPXG 663
P + PP G P G
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTG 331
Score = 35.1 bits (77), Expect = 0.072
Identities = 30/100 (30%), Positives = 33/100 (33%), Gaps = 3/100 (3%)
Frame = +1
Query: 340 GKIXPPPXXKAPGGPXXKFLFXRXWGGGVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPP 519
GK PP P P K G G PP P PP G PP
Sbjct: 248 GKRQAPPAGSPPPPPPPKGS-PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG--SPPPP 304
Query: 520 XXGGFXPXPXX-VXPPPFXXK--XPWGXVPPXKXSXXXPP 630
GG P P PPP + P G +PP + PP
Sbjct: 305 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Score = 30.3 bits (65), Expect = 2.0
Identities = 29/108 (26%), Positives = 34/108 (31%)
Frame = +1
Query: 340 GKIXPPPXXKAPGGPXXKFLFXRXWGGGVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPP 519
G PPP P P GG PP + + P G+PP G L PP
Sbjct: 291 GSPPPPPTGSPPPPP----------AGGSPPPPRAGSPPPPPPPRGSPPT--GSL---PP 335
Query: 520 XXGGFXPXPXXVXPPPFXXKXPWGXVPPXKXSXXXPPGKXXGGRXPXG 663
G P P PP + + P G GR P G
Sbjct: 336 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRG 383
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 39.9 bits (89), Expect = 0.003
Identities = 25/81 (30%), Positives = 27/81 (33%)
Frame = +1
Query: 421 GVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXVXPPPFXXKXPWGXVP 600
G PP P G G+PP PP G P P PPP P G P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP-----PAGGSP 295
Query: 601 PXKXSXXXPPGKXXGGRXPXG 663
P + PP G P G
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTG 316
Score = 35.1 bits (77), Expect = 0.072
Identities = 30/100 (30%), Positives = 33/100 (33%), Gaps = 3/100 (3%)
Frame = +1
Query: 340 GKIXPPPXXKAPGGPXXKFLFXRXWGGGVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPP 519
GK PP P P K G G PP P PP G PP
Sbjct: 233 GKRQAPPAGSPPPPPPPKGS-PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG--SPPPP 289
Query: 520 XXGGFXPXPXX-VXPPPFXXK--XPWGXVPPXKXSXXXPP 630
GG P P PPP + P G +PP + PP
Sbjct: 290 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Score = 30.3 bits (65), Expect = 2.0
Identities = 29/108 (26%), Positives = 34/108 (31%)
Frame = +1
Query: 340 GKIXPPPXXKAPGGPXXKFLFXRXWGGGVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPP 519
G PPP P P GG PP + + P G+PP G L PP
Sbjct: 276 GSPPPPPTGSPPPPP----------AGGSPPPPRAGSPPPPPPPRGSPPT--GSL---PP 320
Query: 520 XXGGFXPXPXXVXPPPFXXKXPWGXVPPXKXSXXXPPGKXXGGRXPXG 663
G P P PP + + P G GR P G
Sbjct: 321 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRG 368
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.38
Identities = 31/110 (28%), Positives = 34/110 (30%), Gaps = 5/110 (4%)
Frame = +1
Query: 343 KIXPPPXXKAPGG--PXXKFLFXRXWGGGVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTP 516
K PP PG P F G PP P G PP G + P
Sbjct: 44 KQAPPSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGG-----IPPPPPMFAGGIPPPP 98
Query: 517 PXXGGFXPXPXXV-XPPPFXXKXPWGXV--PPXKXSXXXPPGKXXGGRXP 657
P GG P P PPP G PP + P GG+ P
Sbjct: 99 PMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKTPVNPALAKLGGKNP 148
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 32.3 bits (70), Expect = 0.51
Identities = 22/67 (32%), Positives = 25/67 (37%)
Frame = +1
Query: 430 PPXKXPTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXVXPPPFXXKXPWGXVPPXK 609
PP GPL+ PP R + PP F P P PPP + PW PP
Sbjct: 26 PPDWFFPGPLRPW---GPPPPWHRNRGPPP----FGPPPPWDRPPPPWRRPPWHRRPPWG 78
Query: 610 XSXXXPP 630
PP
Sbjct: 79 LPPPPPP 85
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 32.3 bits (70), Expect = 0.51
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -1
Query: 497 PFFFGGAPXKXXFKGPVGXFXGGXTPPPHXRXNKNFXXGPPGAF 366
PF F P + F P F G PPP +F GPP F
Sbjct: 292 PFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGF 335
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 481 PPKKKGRLQKTPPXXGGFXPXPXXVXPPP-FXXKXPWGXVPP 603
PP +G PP G P + PPP F P G +PP
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPP 338
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 32.3 bits (70), Expect = 0.51
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -1
Query: 497 PFFFGGAPXKXXFKGPVGXFXGGXTPPPHXRXNKNFXXGPPGAF 366
PF F P + F P F G PPP +F GPP F
Sbjct: 292 PFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGF 335
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 481 PPKKKGRLQKTPPXXGGFXPXPXXVXPPP-FXXKXPWGXVPP 603
PP +G PP G P + PPP F P G +PP
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPP 338
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.67
Identities = 20/63 (31%), Positives = 23/63 (36%)
Frame = +1
Query: 445 PTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXVXPPPFXXKXPWGXVPPXKXSXXX 624
P+GP AP GR PP G P P + PPP G PP +
Sbjct: 760 PSGP-SPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPG 818
Query: 625 PPG 633
P G
Sbjct: 819 PGG 821
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.67
Identities = 20/63 (31%), Positives = 23/63 (36%)
Frame = +1
Query: 445 PTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXVXPPPFXXKXPWGXVPPXKXSXXX 624
P+GP AP GR PP G P P + PPP G PP +
Sbjct: 760 PSGP-SPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPG 818
Query: 625 PPG 633
P G
Sbjct: 819 PGG 821
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 0.88
Identities = 18/67 (26%), Positives = 19/67 (28%)
Frame = -1
Query: 590 PQGXFXXXGGGXTXXGXGXXPPNXGGVFWSRPFFFGGAPXKXXFKGPVGXFXGGXTPPPH 411
P G GG G PP G P GG P + P G PPP
Sbjct: 1555 PMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPPPS 1614
Query: 410 XRXNKNF 390
F
Sbjct: 1615 VEWTSRF 1621
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +1
Query: 418 GGVXPPXKXPTGPLKXXXLGAPPKKKG-RLQKTPPXXGGFXPXPXXVXPPPFXXKXPWGX 594
GG+ PP G + G PP + G Q PP GG P P PPP G
Sbjct: 1557 GGLPPPH----GGMNGWRGGPPPPRGGSHCQGPPPLMGG--PPPRLGMPPPGPPPPNGGP 1610
Query: 595 VPP 603
PP
Sbjct: 1611 PPP 1613
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/77 (32%), Positives = 27/77 (35%), Gaps = 4/77 (5%)
Frame = +1
Query: 439 KXPTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXV----XPPPFXXKXPWGXVPPX 606
K P P L AP G PP GG P P PPP P G +PP
Sbjct: 682 KIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPP---PPPPGGLPP- 737
Query: 607 KXSXXXPPGKXXGGRXP 657
+ PP GG P
Sbjct: 738 -ITGGPPPPPPPGGLPP 753
Score = 29.1 bits (62), Expect = 4.7
Identities = 25/79 (31%), Positives = 25/79 (31%)
Frame = -1
Query: 611 IXXGGTXPQGXFXXXGGGXTXXGXGXXPPNXGGVFWSRPFFFGGAPXKXXFKGPVGXFXG 432
I G P G GG G PP GG P GG P P G
Sbjct: 709 ITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP--GGLPPISGGPPPPPPPPG 766
Query: 431 GXTPPPHXRXNKNFXXGPP 375
G PPP F GPP
Sbjct: 767 GCPPPPPPPPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 4.7
Identities = 27/83 (32%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Frame = +1
Query: 418 GGVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXVXPPPFXXKXPWGXV 597
GG PP P P+ PP G L PP GG P P PP P
Sbjct: 711 GGPPPPPGLP--PITGGP--PPPPPPGGL---PPITGGPPPPPPPGGLPPISGGPPPPPP 763
Query: 598 PP---XKXSXXXPPGKXXGGRXP 657
PP PPG GG P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/77 (32%), Positives = 27/77 (35%), Gaps = 4/77 (5%)
Frame = +1
Query: 439 KXPTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXV----XPPPFXXKXPWGXVPPX 606
K P P L AP G PP GG P P PPP P G +PP
Sbjct: 682 KIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPP---PPPPGGLPP- 737
Query: 607 KXSXXXPPGKXXGGRXP 657
+ PP GG P
Sbjct: 738 -ITGGPPPPPPPGGLPP 753
Score = 29.1 bits (62), Expect = 4.7
Identities = 25/79 (31%), Positives = 25/79 (31%)
Frame = -1
Query: 611 IXXGGTXPQGXFXXXGGGXTXXGXGXXPPNXGGVFWSRPFFFGGAPXKXXFKGPVGXFXG 432
I G P G GG G PP GG P GG P P G
Sbjct: 709 ITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP--GGLPPISGGPPPPPPPPG 766
Query: 431 GXTPPPHXRXNKNFXXGPP 375
G PPP F GPP
Sbjct: 767 GCPPPPPPPPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 4.7
Identities = 27/83 (32%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Frame = +1
Query: 418 GGVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXVXPPPFXXKXPWGXV 597
GG PP P P+ PP G L PP GG P P PP P
Sbjct: 711 GGPPPPPGLP--PITGGP--PPPPPPGGL---PPITGGPPPPPPPGGLPPISGGPPPPPP 763
Query: 598 PP---XKXSXXXPPGKXXGGRXP 657
PP PPG GG P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/77 (32%), Positives = 27/77 (35%), Gaps = 4/77 (5%)
Frame = +1
Query: 439 KXPTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXV----XPPPFXXKXPWGXVPPX 606
K P P L AP G PP GG P P PPP P G +PP
Sbjct: 265 KIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPP---PPPPGGLPP- 320
Query: 607 KXSXXXPPGKXXGGRXP 657
+ PP GG P
Sbjct: 321 -ITGGPPPPPPPGGLPP 336
Score = 29.1 bits (62), Expect = 4.7
Identities = 25/79 (31%), Positives = 25/79 (31%)
Frame = -1
Query: 611 IXXGGTXPQGXFXXXGGGXTXXGXGXXPPNXGGVFWSRPFFFGGAPXKXXFKGPVGXFXG 432
I G P G GG G PP GG P GG P P G
Sbjct: 292 ITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP--GGLPPISGGPPPPPPPPG 349
Query: 431 GXTPPPHXRXNKNFXXGPP 375
G PPP F GPP
Sbjct: 350 GCPPPPPPPPPGGFKGGPP 368
Score = 29.1 bits (62), Expect = 4.7
Identities = 27/83 (32%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Frame = +1
Query: 418 GGVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXVXPPPFXXKXPWGXV 597
GG PP P P+ PP G L PP GG P P PP P
Sbjct: 294 GGPPPPPGLP--PITGGP--PPPPPPGGL---PPITGGPPPPPPPGGLPPISGGPPPPPP 346
Query: 598 PP---XKXSXXXPPGKXXGGRXP 657
PP PPG GG P
Sbjct: 347 PPGGCPPPPPPPPPGGFKGGPPP 369
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +1
Query: 445 PTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXVXPPPFXXKXPWGXVPP 603
P+GP AP GR PP G P P + PPP G PP
Sbjct: 760 PSGP-SPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPP 811
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/82 (30%), Positives = 27/82 (32%), Gaps = 3/82 (3%)
Frame = +1
Query: 421 GVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXVXPPPFXXKXP---WG 591
G PP P + PP + PP G P P PPP P G
Sbjct: 258 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPP--PPPPGRTPGPPGMPG 315
Query: 592 XVPPXKXSXXXPPGKXXGGRXP 657
PP S PPG GG P
Sbjct: 316 MPPPPPPSRFGPPG--MGGMPP 335
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/82 (30%), Positives = 27/82 (32%), Gaps = 3/82 (3%)
Frame = +1
Query: 421 GVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXVXPPPFXXKXP---WG 591
G PP P + PP + PP G P P PPP P G
Sbjct: 268 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPP--PPPPGRTPGPPGMPG 325
Query: 592 XVPPXKXSXXXPPGKXXGGRXP 657
PP S PPG GG P
Sbjct: 326 MPPPPPPSRFGPPG--MGGMPP 345
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +1
Query: 445 PTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXVXPPPFXXKXPWGXVPP 603
P+GP AP GR PP G P P + PPP G PP
Sbjct: 760 PSGP-SPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPP 811
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = +1
Query: 430 PPXKXPTGPLKXXXLGA-PPKKKGRLQKTPPXXGGFXPXP--XXVXPPP 567
PP P GP +G PP + LQ PP G P P PPP
Sbjct: 60 PPSTMPPGPHGMPFMGGPPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPP 108
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = +1
Query: 421 GVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXVXPPPFXXKXPWGXVP 600
G+ PP P P +G PP G PP G P V PP P VP
Sbjct: 81 GMPPPGMGPP-PFMPPPIGMPPPPLGM----PPPHIGLGAAPYAVPPPMSLLGPPPFSVP 135
Query: 601 P 603
P
Sbjct: 136 P 136
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = +1
Query: 421 GVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXVXPPPFXXKXPWGXVP 600
G+ PP P P +G PP G PP G P V PP P VP
Sbjct: 104 GMPPPGMGPP-PFMPPPIGMPPPPLGM----PPPHIGLGAAPYAVPPPMSLLGPPPFSVP 158
Query: 601 P 603
P
Sbjct: 159 P 159
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = +1
Query: 421 GVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPPXXGGFXPXPXXVXPPPFXXKXPWGXVP 600
G+ PP P P +G PP G PP G P V PP P VP
Sbjct: 354 GMPPPGMGPP-PFMPPPIGMPPPPLGM----PPPHIGLGAAPYAVPPPMSLLGPPPFSVP 408
Query: 601 P 603
P
Sbjct: 409 P 409
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 6.2
Identities = 24/72 (33%), Positives = 24/72 (33%)
Frame = +1
Query: 352 PPPXXKAPGGPXXKFLFXRXWGGGVXPPXKXPTGPLKXXXLGAPPKKKGRLQKTPPXXGG 531
PPP P P L PP P PL GAPP PP GG
Sbjct: 535 PPPVSSIPPPPPIAGLLAANGTNVPIPPPPPP--PLPQNLSGAPPPP----PPPPPMLGG 588
Query: 532 FXPXPXXVXPPP 567
P P PPP
Sbjct: 589 PPPPP----PPP 596
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,623,628
Number of Sequences: 27780
Number of extensions: 263887
Number of successful extensions: 508
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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