Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_J23
(931 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 129 3e-30
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 78 8e-15
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 78 8e-15
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 33 0.29
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 31 0.89
Z68014-2|CAA92024.1| 565|Caenorhabditis elegans Hypothetical pr... 31 1.6
AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical ... 31 1.6
AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical ... 31 1.6
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF039718-6|AAB96743.1| 249|Caenorhabditis elegans Hypothetical ... 29 4.7
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 6.3
AF038611-7|AAB92040.1| 466|Caenorhabditis elegans Hypothetical ... 29 6.3
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 8.3
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 129 bits (311), Expect = 3e-30
Identities = 69/175 (39%), Positives = 90/175 (51%), Gaps = 1/175 (0%)
Frame = +3
Query: 225 PAFANVGRTAGVQIWRIQNFEPIPVAXKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWI 404
PA A +G+ G+ +WRI F PV D G FY GD+YI L D WD+H+W+
Sbjct: 8 PALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDG----CWDVHFWL 63
Query: 405 GRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFXSYFQTPLXYLXGGNPSGF 584
G+ ++ DE G AAI TV +DD GG QHRE +ES LF SYF + Y+ GG SG+
Sbjct: 64 GKNASTDEIGVAAIKTVEIDDSLGGIPTQHREIQNYESPLFLSYFPDGIRYVSGGYESGY 123
Query: 585 NXVVTNXXAHK-RMFHVKGNXXVPXXQXXPHIPSXNXXXCPLPXLHNDLYVLVXP 746
V K +FH KG V + + S N + L DLYV + P
Sbjct: 124 RHVDDQFKNWKPHLFHCKGKRNVRCTEVECEVNSLNLGDVFILDLGKDLYVWMPP 178
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 78.2 bits (184), Expect = 8e-15
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Frame = +3
Query: 237 NVGRTAGVQIWRIQNFEPIPVAXKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRES 416
+VG G+ +W I+NF P + G+FY D+Y++L+TT ++ L I YW+G +
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 417 TQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFXSYFQTPLXYLXGGNP-SGFNXV 593
+ D+ +A+ VGL + RE M E+ F + F + Y+ GG SGF
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF--Y 620
Query: 594 VTNXXAH 614
T AH
Sbjct: 621 TTEKPAH 627
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 78.2 bits (184), Expect = 8e-15
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Frame = +3
Query: 237 NVGRTAGVQIWRIQNFEPIPVAXKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRES 416
+VG G+ +W I+NF P + G+FY D+Y++L+TT ++ L I YW+G +
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 417 TQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFXSYFQTPLXYLXGGNP-SGFNXV 593
+ D+ +A+ VGL + RE M E+ F + F + Y+ GG SGF
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF--Y 620
Query: 594 VTNXXAH 614
T AH
Sbjct: 621 TTEKPAH 627
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 33.1 bits (72), Expect = 0.29
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 850 YPPXGXPXXSHPXWXHPLXXXXPPQPP 930
YPP G P HP + HP PP P
Sbjct: 112 YPPYGMPPRHHPGYPHPAYGYPPPGAP 138
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 31.5 bits (68), Expect = 0.89
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 319 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 480
+ST + T+ P T +T STT + + TS EPP SS P+ TT++
Sbjct: 91 SSTTPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 150
Query: 481 PRSSTERP 504
+STE P
Sbjct: 151 ETTSTEAP 158
Score = 31.5 bits (68), Expect = 0.89
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 319 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 480
+ST + T+ P T +T STT + + TS EPP SS P+ TT++
Sbjct: 137 SSTSPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 196
Query: 481 PRSSTERP 504
+STE P
Sbjct: 197 ETTSTEPP 204
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +1
Query: 319 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 480
+ST + T+ P T +T S T + + TS EPP SS P+ TT++
Sbjct: 804 SSTSPVQTTTITAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 863
Query: 481 PRSSTERP 504
+STE P
Sbjct: 864 ETTSTEPP 871
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +1
Query: 319 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 480
+ST + T+ P T +T S T + + TS EPP SS P+ TT++
Sbjct: 666 SSTTPVQTTTTTAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 725
Query: 481 PRSSTERP 504
+STE P
Sbjct: 726 ETTSTEPP 733
>Z68014-2|CAA92024.1| 565|Caenorhabditis elegans Hypothetical
protein W04G3.2 protein.
Length = 565
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 296 GYWFEVLYSPYLHTG-CSADIGKSRMDFGFVTGVFI 192
G W++V+YSP + TG CS K D G TG +
Sbjct: 402 GQWYQVIYSPPVSTGPCSMVSYKKLSDNGEATGSIV 437
>AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical
protein Y62F5A.1b protein.
Length = 297
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 349 YGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSS 492
Y R T A I I T + S+R + PP S+P+ SS P SS
Sbjct: 191 YNRDET-AKIVKSILTGEGIRSQRTMAPAPPSSAPMTTAPSSTGPSSS 237
>AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical
protein Y62F5A.1a protein.
Length = 325
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 349 YGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSS 492
Y R T A I I T + S+R + PP S+P+ SS P SS
Sbjct: 191 YNRDET-AKIVKSILTGEGIRSQRTMAPAPPSSAPMTTAPSSTGPSSS 237
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.1 bits (62), Expect = 4.7
Identities = 34/141 (24%), Positives = 51/141 (36%), Gaps = 4/141 (2%)
Frame = +1
Query: 352 GRPRTVATIYHGIST-TGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSSTERPWVTKVLCS 528
G + TI +ST TGS+ + T +SP T + A + +T +P VT +
Sbjct: 513 GTSKQTNTISPHLSTITGSIVTSTPTMAPQTSASPTTTPTHTTASQPTTTKPVVTTNSVT 572
Query: 529 XHISRHP*XIWXEXIRPVLTXSSPTRXPTNECSTSKGTXMXPLXXSIP---TYLPXTXXX 699
+ P ++P PT ST++ S P T T
Sbjct: 573 PSTGTTTVPVPTTTGSPTTQTTAPVTKPTVPSSTTQTAPPVTTPTSQPPVTTTSLLTTLT 632
Query: 700 APFLXYTTTSMSLSAHXXXNP 762
P + TTT + SA P
Sbjct: 633 TPTVPVTTTVVPSSATVPTTP 653
>AF039718-6|AAB96743.1| 249|Caenorhabditis elegans Hypothetical
protein T12F5.1 protein.
Length = 249
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 144 TATKPQEISGPITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAXK 308
T K QE+ GP+ D+ D AK ++ R G QNF+ I + K
Sbjct: 171 TPEKGQEVEGPVEEFDDETNEDVAKAR-SYNPAARKLGGSSKSDQNFQKINLRKK 224
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = -3
Query: 929 GGWGGXXXXXG-WXQXGWXXXGXPXGGXXSAXXSXGVRDXRDXXX*WXEGNGV*GXXG 759
GGWGG G W W G P G + G R W NG G G
Sbjct: 23 GGWGGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGD-WGGNNGGGGNWG 79
>AF038611-7|AAB92040.1| 466|Caenorhabditis elegans Hypothetical
protein E04A4.6 protein.
Length = 466
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 240 VGRTAGVQIWRIQNFEPIPVAXKDIGKFYKG 332
VG AG Q +R++ P+P A +G Y G
Sbjct: 259 VGYKAGEQTYRVKGSIPVPFAVPTLGNCYSG 289
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.3 bits (60), Expect = 8.3
Identities = 33/152 (21%), Positives = 52/152 (34%), Gaps = 3/152 (1%)
Frame = +1
Query: 280 TSNQYPLLXRT*ENSTKEIHTSFYGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLA 459
T+ P T +T T+ P T T +TT + + T ++P
Sbjct: 170 TTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTP---TTTTTTPTTTTTVPTTTTTTPTT 226
Query: 460 WTTSSGAPRSSTERPWVTKV---LCSXHISRHP*XIWXEXIRPVLTXSSPTRXPTNECST 630
TT++ P ++T P T S + P +P T ++PT PT +
Sbjct: 227 TTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTP 286
Query: 631 SKGTXMXPLXXSIPTYLPXTXXXAPFLXYTTT 726
+ T S T T + TTT
Sbjct: 287 TTTTTTAKTTKSTTTTTKTTKTTSTPTTTTTT 318
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,483,567
Number of Sequences: 27780
Number of extensions: 408503
Number of successful extensions: 1172
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -