Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_J19
(894 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ri... 99 1e-20
BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, larg... 99 1e-20
BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, larg... 99 1e-20
AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 pr... 99 1e-20
CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. 100 1e-20
AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosph... 97 6e-20
CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. 93 1e-18
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 36 0.20
AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein pr... 34 0.80
AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein. 34 0.80
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 32 2.4
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 32 2.4
AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrom... 32 2.4
AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein. 32 2.4
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 32 2.4
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 32 3.2
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 31 5.6
AK127803-1|BAC87142.1| 1063|Homo sapiens protein ( Homo sapiens ... 31 5.6
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 31 5.6
AL078621-10|CAB81647.1| 232|Homo sapiens protein ( G islands. ... 31 5.9
AB058717-1|BAB47443.1| 1285|Homo sapiens KIAA1814 protein protein. 25 6.7
X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein. 31 7.5
M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein. 31 7.5
CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein. 31 7.5
BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein. 31 7.5
BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein. 31 7.5
BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein. 31 7.5
AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227] ... 31 7.5
AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein. 31 7.5
AB051514-1|BAB21818.1| 1130|Homo sapiens KIAA1727 protein protein. 25 8.8
BC027450-1|AAH27450.1| 469|Homo sapiens SETD1A protein protein. 25 9.4
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 30 9.9
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 30 9.9
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 30 9.9
AL354775-1|CAI12730.1| 276|Homo sapiens protein ( Human DNA seq... 30 9.9
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 30 9.9
>M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P1 mRNA, complete cds. ).
Length = 114
Score = 99 bits (238), Expect = 1e-20
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +2
Query: 125 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 304
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 305 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 460
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 99 bits (238), Expect = 1e-20
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +2
Query: 125 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 304
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 305 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 460
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 99 bits (238), Expect = 1e-20
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +2
Query: 125 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 304
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 305 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 460
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1
protein.
Length = 114
Score = 99 bits (238), Expect = 1e-20
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +2
Query: 125 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 304
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 305 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 460
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 99.5 bits (237), Expect = 1e-20
Identities = 51/114 (44%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +2
Query: 125 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 304
M S +ELAC+YSAL+L DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALVLHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 305 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 460
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal
phosphoprotein P1 protein.
Length = 113
Score = 97.5 bits (232), Expect = 6e-20
Identities = 51/113 (45%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Frame = +2
Query: 125 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 304
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 305 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLF 457
N+G+G SDDDMGFGLF
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLF 113
>CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 93.1 bits (221), Expect = 1e-18
Identities = 50/114 (43%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Frame = +2
Query: 125 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 304
M S +ELA +YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELARIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 305 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 460
++G+G SDDDMGFGLFD
Sbjct: 61 CDVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 35.9 bits (79), Expect = 0.20
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +2
Query: 731 TXXPSPPXPPXXPXXXXXXXXXXXXXXXXXXXXXXXPXPASPPP*PXPXTPPP 889
T P PP PP P P P PPP P P PPP
Sbjct: 1957 TPPPPPPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPP 2009
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 740 PSPPXPPXXPXXXXXXXXXXXXXXXXXXXXXXXPXPASPPP*PXPXTPPP 889
P PP PP P P PPP P P PPP
Sbjct: 1966 PLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPP 2015
>AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein
protein.
Length = 1009
Score = 33.9 bits (74), Expect = 0.80
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 740 PSPPXPPXXPXXXXXXXXXXXXXXXXXXXXXXXPXPASPPP*PXPXTPPP 889
P PP PP P P P PPP P P PPP
Sbjct: 441 PLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPPP 490
>AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.
Length = 1112
Score = 33.9 bits (74), Expect = 0.80
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 740 PSPPXPPXXPXXXXXXXXXXXXXXXXXXXXXXXPXPASPPP*PXPXTPPP 889
P PP PP P P P PPP P P PPP
Sbjct: 544 PLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPPP 593
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/63 (28%), Positives = 21/63 (33%)
Frame = +1
Query: 562 PXPPPXPPPRPXXXXXPLX*XFXRPPKXDXIXXPTXXPXXN*KWPXPTXPXPREXWDXXP 741
P PPP PPP P F P P+ P + P P P P + P
Sbjct: 320 PAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLP 379
Query: 742 LSP 750
P
Sbjct: 380 PPP 382
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/63 (28%), Positives = 21/63 (33%)
Frame = +1
Query: 562 PXPPPXPPPRPXXXXXPLX*XFXRPPKXDXIXXPTXXPXXN*KWPXPTXPXPREXWDXXP 741
P PPP PPP P F P P+ P + P P P P + P
Sbjct: 320 PAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLP 379
Query: 742 LSP 750
P
Sbjct: 380 PPP 382
>AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrome
protein family member 4 protein.
Length = 625
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/63 (28%), Positives = 21/63 (33%)
Frame = +1
Query: 562 PXPPPXPPPRPXXXXXPLX*XFXRPPKXDXIXXPTXXPXXN*KWPXPTXPXPREXWDXXP 741
P PPP PPP P F P P+ P + P P P P + P
Sbjct: 448 PAPPPPPPPMIGIPPPPPPIGFGSPGTPPPPSSPSFPPHPDFAAPPPLPPPPAADYPTLP 507
Query: 742 LSP 750
P
Sbjct: 508 PPP 510
>AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein.
Length = 496
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/63 (28%), Positives = 21/63 (33%)
Frame = +1
Query: 562 PXPPPXPPPRPXXXXXPLX*XFXRPPKXDXIXXPTXXPXXN*KWPXPTXPXPREXWDXXP 741
P PPP PPP P F P P+ P + P P P P + P
Sbjct: 319 PAPPPPPPPMIGIPPPPPPIGFGSPGTPPPPSSPSFPPHPDFAAPPPLPPPPAADYPTLP 378
Query: 742 LSP 750
P
Sbjct: 379 PPP 381
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein
protein.
Length = 498
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/63 (28%), Positives = 21/63 (33%)
Frame = +1
Query: 562 PXPPPXPPPRPXXXXXPLX*XFXRPPKXDXIXXPTXXPXXN*KWPXPTXPXPREXWDXXP 741
P PPP PPP P F P P+ P + P P P P + P
Sbjct: 320 PAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLP 379
Query: 742 LSP 750
P
Sbjct: 380 PPP 382
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 31.9 bits (69), Expect = 3.2
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +1
Query: 562 PXPPPXPPPRPXXXXXPLX*XFXRPPKXDXIXXPTXXPXXN*KWPXPTXPXP 717
P PPP PPP P PL PP P P P P P P
Sbjct: 955 PPPPPPPPPHPPLPPPPLP-----PPPLPLRLPPLPPPPLPRPHPPPPPPLP 1001
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 839 PXPASPPP*PXPXTPPP 889
P P+SPPP P P PPP
Sbjct: 127 PTPSSPPPPPLPPPPPP 143
>AK127803-1|BAC87142.1| 1063|Homo sapiens protein ( Homo sapiens
cDNA FLJ45904 fis, clone OCBBF3026361. ).
Length = 1063
Score = 31.1 bits (67), Expect = 5.6
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = +1
Query: 562 PXPPPXPPPRPXXXXXPLX*XFXRPPKXDXIXXPTXXPXXN*KWPXPTXPXPREXWDXXP 741
P PPP PPP P PL + P+ + P P P PT P+ P
Sbjct: 543 PQPPPPPPPPPPSQPQPL-----QQPQPPQLQPPHQVPPQPQTQPPPT-QQPQPPTQAAP 596
Query: 742 LSP 750
L P
Sbjct: 597 LHP 599
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 839 PXPASPPP*PXPXTPPP 889
P P+SPPP P P PPP
Sbjct: 672 PTPSSPPPPPLPPPPPP 688
>AL078621-10|CAB81647.1| 232|Homo sapiens protein ( G islands.
).).
Length = 232
Score = 30.7 bits (66), Expect = 7.5
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = +1
Query: 568 PPPXPPPRPXXXXXPLX*XFXRPPKXDXIXXPTXXPXXN*KWPXPTXPXPREXWDXXPLS 747
PPP PP L F PP+ P P P P P P P
Sbjct: 120 PPPIRPPFSHPLSAHLPWYFQPPPRPLPPRPPAAQPRPPPSPPPPPPPPPSPLPPPPPPP 179
Query: 748 PXTPS 762
P TPS
Sbjct: 180 PPTPS 184
Score = 28.3 bits (60), Expect(2) = 5.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 839 PXPASPPP*PXPXTPPP 889
P P PPP P P PPP
Sbjct: 162 PPPPPPPPSPLPPPPPP 178
Score = 21.4 bits (43), Expect(2) = 5.9
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 740 PSPPXPPXXP 769
PSPP PP P
Sbjct: 159 PSPPPPPPPP 168
>AB058717-1|BAB47443.1| 1285|Homo sapiens KIAA1814 protein protein.
Length = 1285
Score = 25.0 bits (52), Expect(2) = 6.7
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 562 PXPPPXPPPRP 594
P PPP PPP P
Sbjct: 1140 PPPPPPPPPLP 1150
Score = 24.2 bits (50), Expect(2) = 6.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 547 VKXHXPXPPPXPPP 588
V+ P PPP PPP
Sbjct: 1134 VETRPPPPPPPPPP 1147
>X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/53 (39%), Positives = 22/53 (41%)
Frame = -2
Query: 719 RGXGXVGXGHF*LXXGXKVGXXXLSXFGGRXNXX*RGXXXXXGRGGGXGGGXG 561
RG G G G F G + G FGG G GRGGG GGG G
Sbjct: 8 RGGGFGGRGGF----GDRGGRGGRGGFGGGRGRG--GGFRGRGRGGGGGGGGG 54
>M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/53 (39%), Positives = 22/53 (41%)
Frame = -2
Query: 719 RGXGXVGXGHF*LXXGXKVGXXXLSXFGGRXNXX*RGXXXXXGRGGGXGGGXG 561
RG G G G F G + G FGG G GRGGG GGG G
Sbjct: 8 RGGGFGGRGGF----GDRGGRGGRGGFGGGRGRG--GGFRGRGRGGGGGGGGG 54
>CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein.
Length = 321
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/53 (39%), Positives = 22/53 (41%)
Frame = -2
Query: 719 RGXGXVGXGHF*LXXGXKVGXXXLSXFGGRXNXX*RGXXXXXGRGGGXGGGXG 561
RG G G G F G + G FGG G GRGGG GGG G
Sbjct: 8 RGGGFGGRGGF----GDRGGRGGRGGFGGGRGRG--GGFRGRGRGGGGGGGGG 54
>BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/53 (39%), Positives = 22/53 (41%)
Frame = -2
Query: 719 RGXGXVGXGHF*LXXGXKVGXXXLSXFGGRXNXX*RGXXXXXGRGGGXGGGXG 561
RG G G G F G + G FGG G GRGGG GGG G
Sbjct: 8 RGGGFGGRGGF----GDRGGRGGRGGFGGGRGRG--GGFRGRGRGGGGGGGGG 54
>BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/53 (39%), Positives = 22/53 (41%)
Frame = -2
Query: 719 RGXGXVGXGHF*LXXGXKVGXXXLSXFGGRXNXX*RGXXXXXGRGGGXGGGXG 561
RG G G G F G + G FGG G GRGGG GGG G
Sbjct: 8 RGGGFGGRGGF----GDRGGRGGRGGFGGGRGRG--GGFRGRGRGGGGGGGGG 54
>BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/53 (39%), Positives = 22/53 (41%)
Frame = -2
Query: 719 RGXGXVGXGHF*LXXGXKVGXXXLSXFGGRXNXX*RGXXXXXGRGGGXGGGXG 561
RG G G G F G + G FGG G GRGGG GGG G
Sbjct: 8 RGGGFGGRGGF----GDRGGRGGRGGFGGGRGRG--GGFRGRGRGGGGGGGGG 54
>AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227]
protein.
Length = 227
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/53 (39%), Positives = 22/53 (41%)
Frame = -2
Query: 719 RGXGXVGXGHF*LXXGXKVGXXXLSXFGGRXNXX*RGXXXXXGRGGGXGGGXG 561
RG G G G F G + G FGG G GRGGG GGG G
Sbjct: 8 RGGGFGGRGGF----GDRGGRGGRGGFGGGRGRG--GGFRGRGRGGGGGGGGG 54
>AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein.
Length = 318
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/53 (39%), Positives = 22/53 (41%)
Frame = -2
Query: 719 RGXGXVGXGHF*LXXGXKVGXXXLSXFGGRXNXX*RGXXXXXGRGGGXGGGXG 561
RG G G G F G + G FGG G GRGGG GGG G
Sbjct: 5 RGGGFGGRGGF----GDRGGRGGRGGFGGGRGRG--GGFRGRGRGGGGGGGGG 51
>AB051514-1|BAB21818.1| 1130|Homo sapiens KIAA1727 protein protein.
Length = 1130
Score = 25.4 bits (53), Expect(2) = 8.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 562 PXPPPXPPPRP 594
P PPP PPP P
Sbjct: 22 PPPPPPPPPSP 32
Score = 23.4 bits (48), Expect(2) = 8.8
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 568 PPPXPPPRPXXXXXP 612
PPP PPP P P
Sbjct: 46 PPPPPPPLPGEPPIP 60
>BC027450-1|AAH27450.1| 469|Homo sapiens SETD1A protein protein.
Length = 469
Score = 25.0 bits (52), Expect(2) = 9.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 562 PXPPPXPPPR 591
P PPP PPPR
Sbjct: 166 PPPPPPPPPR 175
Score = 23.8 bits (49), Expect(2) = 9.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 544 YVKXHXPXPPPXPPP 588
+ + P PPP PPP
Sbjct: 159 HARRRRPPPPPPPPP 173
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 30.3 bits (65), Expect = 9.9
Identities = 20/71 (28%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Frame = +1
Query: 568 PPPXP----PPRPXXXXXPLX*XFXRPPKXDXIXXPTXXPXXN*KWPXPTXPXPREXWDX 735
PPP P PPRP PP + P P P P P + +
Sbjct: 227 PPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQ 286
Query: 736 XPLSPXTPSXP 768
PL P P P
Sbjct: 287 PPLGPLPPGPP 297
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 30.3 bits (65), Expect = 9.9
Identities = 20/71 (28%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Frame = +1
Query: 568 PPPXP----PPRPXXXXXPLX*XFXRPPKXDXIXXPTXXPXXN*KWPXPTXPXPREXWDX 735
PPP P PPRP PP + P P P P P + +
Sbjct: 227 PPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQ 286
Query: 736 XPLSPXTPSXP 768
PL P P P
Sbjct: 287 PPLGPLPPGPP 297
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 30.3 bits (65), Expect = 9.9
Identities = 19/69 (27%), Positives = 22/69 (31%)
Frame = +1
Query: 562 PXPPPXPPPRPXXXXXPLX*XFXRPPKXDXIXXPTXXPXXN*KWPXPTXPXPREXWDXXP 741
P PP PP P P PP + P P P P P + + P
Sbjct: 273 PPRPPLGPPGPPGPPGP-------PPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPP 325
Query: 742 LSPXTPSXP 768
L P P P
Sbjct: 326 LGPLPPGPP 334
>AL354775-1|CAI12730.1| 276|Homo sapiens protein ( Human DNA
sequence from clone RP11-223F20 on chromosome 13
Contains a novel heterogeneous nuclear ribonucleoprotein
family A protein and).
Length = 276
Score = 30.3 bits (65), Expect = 9.9
Identities = 23/69 (33%), Positives = 25/69 (36%)
Frame = -2
Query: 767 GXEGVXGERGXXSQXSRGXGXVGXGHF*LXXGXKVGXXXLSXFGGRXNXX*RGXXXXXGR 588
G G G G S+ S G G G F G G S GG G +
Sbjct: 141 GGRGGYGGGGGGSRGSYGRGDGGYNRFGRDGGNYGGGPGYSSRGGYGG----GGTGYGNQ 196
Query: 587 GGGXGGGXG 561
GGG GGG G
Sbjct: 197 GGGYGGGGG 205
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 30.3 bits (65), Expect = 9.9
Identities = 20/71 (28%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Frame = +1
Query: 568 PPPXP----PPRPXXXXXPLX*XFXRPPKXDXIXXPTXXPXXN*KWPXPTXPXPREXWDX 735
PPP P PPRP PP + P P P P P + +
Sbjct: 227 PPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQ 286
Query: 736 XPLSPXTPSXP 768
PL P P P
Sbjct: 287 PPLGPLPPGPP 297
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,440,375
Number of Sequences: 237096
Number of extensions: 1971197
Number of successful extensions: 23821
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 6463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18558
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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