Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_J15
(912 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 58 2e-09
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.92
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 2.8
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 4.9
SPBC4B4.04 |||translation initiation factor eIF2A |Schizosacchar... 27 4.9
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 6.5
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 8.5
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 58.0 bits (134), Expect = 2e-09
Identities = 25/42 (59%), Positives = 34/42 (80%)
Frame = +3
Query: 393 QNYTFQTEVNRMMKLIINSLYRNKEIFLRXLISNGSDALDXI 518
+ + F+ E++++M LIIN++Y NKEIFLR LISN SDALD I
Sbjct: 5 ETFKFEAEISQLMSLIINTVYSNKEIFLRELISNASDALDKI 46
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.1 bits (62), Expect = 0.92
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +2
Query: 788 PXPPCXHSPXXSPXXPQRPPPXHLXXXPXXXLPPPPP 898
P PP P +P PPP + P PPPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPP--PPPPP 768
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 788 PXPPCXHSPXXSPXXPQRPPPXHLXXXPXXXLPPPP 895
P PP H P PPP H P +PPPP
Sbjct: 208 PPPPMHHKPGEH----MPPPPMH--HEPGEHMPPPP 237
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 788 PXPPCXHSPXXSPXXPQRPPPXHLXXXPXXXLPPPP 895
P PP H P PPP H P +PPPP
Sbjct: 221 PPPPMHHEPGEH----MPPPPMH--HEPGEHMPPPP 250
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 788 PXPPCXHSPXXSPXXPQRPPPXHLXXXPXXXLPPPP 895
P PP H P PPP H P +PPPP
Sbjct: 234 PPPPMHHEPGEH----MPPPPMH--HEPGEHMPPPP 263
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 788 PXPPCXHSPXXSPXXPQRPPPXHLXXXPXXXLPPPP 895
P PP H P PPP H P +PPPP
Sbjct: 247 PPPPMHHEPGEH----MPPPPMH--HEPGEHMPPPP 276
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 788 PXPPCXHSPXXSPXXPQRPPPXHLXXXPXXXLPPPP 895
P PP H P PPP H P +PPPP
Sbjct: 260 PPPPMHHEPGEH----MPPPPMH--HEPGEHMPPPP 289
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 788 PXPPCXHSPXXSPXXPQRPPPXHLXXXPXXXLPPPP 895
P PP H P PPP H P +PPPP
Sbjct: 273 PPPPMHHEPGEH----MPPPPMH--HEPGEHMPPPP 302
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 788 PXPPCXHSPXXSPXXPQRPPPXHLXXXPXXXLPPPP 895
P PP H P PPP H P +PPPP
Sbjct: 286 PPPPMHHEPGEH----MPPPPMH--HEPGEHMPPPP 315
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 788 PXPPCXHSPXXSPXXPQRPPPXHLXXXPXXXLPPPP 895
P PP H P PPP H P +PPPP
Sbjct: 299 PPPPMHHEPGEH----MPPPPMH--HEPGEHMPPPP 328
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 788 PXPPCXHSPXXSPXXPQRPPPXHLXXXPXXXLPPPP 895
P PP H P PPP H P +PPPP
Sbjct: 312 PPPPMHHEPGEH----MPPPPMH--HEPGEHMPPPP 341
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 824 PXXPQRPPPXHLXXXPXXXLPPPPP 898
P P PPP P PPPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC4B4.04 |||translation initiation factor eIF2A
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 576
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -3
Query: 217 PESSRTPSPKSQICFIAGVKNIQRDLDVNYSILNNCRKC*LTQVPSFN 74
P ++ SP S+ +AG N+Q +D+ + NN +K +T V + N
Sbjct: 311 PRNTLIFSPNSRYILLAGFGNLQGSIDI-FDAANNMKK--ITTVEAAN 355
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +2
Query: 788 PXPPCXHSPXXSPXXPQRPPPXHLXXXPXXXLPPPPPXXP 907
P PP P PQRP + P PP P P
Sbjct: 605 PQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVP 644
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +2
Query: 788 PXPPCXHSPXXSPXXPQRPPPXHLXXXPXXXLPPPPPXXP 907
P PP P PQRP + P PP P P
Sbjct: 635 PQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVP 674
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +2
Query: 794 PPCXHSPXXSPXXPQRPPPXHLXXXPXXXLPPPPPXXP 907
PP +P P PPP P PPP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,332,307
Number of Sequences: 5004
Number of extensions: 36903
Number of successful extensions: 127
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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