Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_J10
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0515 - 3864796-3865425                                           30   2.2  
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    29   5.1  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   6.8  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   6.8  
11_01_0066 - 536281-537196,537397-537452                               28   9.0  

>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 12/37 (32%), Positives = 14/37 (37%)
 Frame = +2

Query: 803 PPPPXXXSKKXTPXSXXGXXPXDXKNPXXXPXKPPPP 913
           PPPP   +    P       P    +P   P  PPPP
Sbjct: 73  PPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPP 109



 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/46 (30%), Positives = 16/46 (34%)
 Frame = +1

Query: 775 PXXXGFSXXPPPPRXXLXKXXPQXKXGXXPXGXXKSXXXPPETPPP 912
           P   G    PPPP   +    P       P     S   PP +PPP
Sbjct: 63  PPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPP 108


>03_02_0455 -
           8630543-8630893,8630994-8631068,8631149-8631223,
           8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/40 (32%), Positives = 14/40 (35%)
 Frame = +2

Query: 794 PXXPPPPXXXSKKXTPXSXXGXXPXDXKNPXXXPXKPPPP 913
           P  PPPP        P +  G  P     P      PPPP
Sbjct: 270 PQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPP 309


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/40 (30%), Positives = 14/40 (35%)
 Frame = +2

Query: 794 PXXPPPPXXXSKKXTPXSXXGXXPXDXKNPXXXPXKPPPP 913
           P  PPPP     +  P       P    +    P  PPPP
Sbjct: 603 PPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPP 642


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 13/40 (32%), Positives = 13/40 (32%)
 Frame = +2

Query: 794 PXXPPPPXXXSKKXTPXSXXGXXPXDXKNPXXXPXKPPPP 913
           P  PPPP        P    G  P     P      PPPP
Sbjct: 341 PKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380


>11_01_0066 - 536281-537196,537397-537452
          Length = 323

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/37 (29%), Positives = 13/37 (35%)
 Frame = +2

Query: 803 PPPPXXXSKKXTPXSXXGXXPXDXKNPXXXPXKPPPP 913
           PP P   ++   P       P     P   P  PPPP
Sbjct: 197 PPTPPTIARPPRPLPPASPPPPSIATPPPSPASPPPP 233


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,868,699
Number of Sequences: 37544
Number of extensions: 223876
Number of successful extensions: 767
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)